Genome Meta Information: Actinomyces radicidentis CCUG 36733 (GCA_001553565.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001553565.1 | ||
| HOMD Taxon-ID | HMT-746 | ||
| Species Name (in use by HOMD) | Actinomyces radicidentis | ||
| Organism Name (as deposited) | HMT-746 Actinomyces radicidentis CCUG 36733 | ||
| Strain or Isolate | CCUG 36733 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces radicidentis |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 207.0x | ||
| Contigs |
|
||
| Total Sequence Length | 3,051,613 (bp) | ||
| GC Percentage | 72.58 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/565/GCA_001553565.1_ASM155356v1 | ||
| CDS | 2544 | ||
| Genes | 2630 | ||
| mRNA | 2630 | ||
| misc RNA | 21 | ||
| rRNA | 9 | ||
| tRNA | 55 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 1.9 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.01 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM155356v1 |
| GenBank Assembly Accession | GCA_001553565.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001553565.1 [NCBI] |
| BioSample | SAMN04435863 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2016-01-22T19:16:05.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 111015 |
| Isolation Source | Infected tooth root canal |
| Geo Location | Sweden |
