Genome Meta Information: Alistipes onderdonkii 2789STDY5834947 (GCA_001405855.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001405855.1 | ||
| HOMD Taxon-ID | HMT-964 | ||
| Species Name (in use by HOMD) | Alistipes onderdonkii | ||
| Organism Name (as deposited) | HMT-964 Alistipes onderdonkii 2789STDY5834947 | ||
| Strain or Isolate | 2789STDY5834947 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Rikenellaceae;g__Alistipes; s__Alistipes onderdonkii |
||
| Sequencing Technology | |||
| Genome Coverage | 100.0x | ||
| Contigs |
|
||
| Total Sequence Length | 3,215,546 (bp) | ||
| GC Percentage | 58.26 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/405/855/GCA_001405855.1_14207_7_70 | ||
| CDS | 2638 | ||
| Genes | 2706 | ||
| mRNA | 2706 | ||
| misc RNA | 14 | ||
| rRNA | 3 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 86.52 % | ||
| CheckM Completeness | 99.28 % | ||
| CheckM Contamination | 0.48 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.26 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 14207_7#70 |
| GenBank Assembly Accession | GCA_001405855.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001405855.1 [NCBI] |
| BioSample | SAMEA3545410 [NCBI] |
| BioProject | PRJEB10915 [NCBI] |
| Submitter | SC |
| Submission Date | 2015-09-23T14:07:35.526 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | CZBZ01 |
| NCBI TaxID | 214856 |
| Isolation Source | feces |
| Geo Location | United Kingdom |
