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Genome Meta Information:
Streptococcus
gordonii
771_SOLI (GCA_001074345.1)
| HOMD Genome-ID |
GCA_001074345.1
|
| HOMD Taxon-ID |
HMT-622
|
| Species Name (in use by HOMD) |
Streptococcus gordonii
|
| Organism Name (as deposited) |
HMT-622 Streptococcus gordonii 771_SOLI
|
| Strain or Isolate |
771_SOLI
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;
s__Streptococcus gordonii |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
18.0x
|
| Contigs |
Number of Contigs: 149
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
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|
|
| Total Sequence Length |
2,190,411 (bp) |
| GC Percentage |
40.43
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/074/345/GCA_001074345.1_ASM107434v1
|
| CDS |
2052
|
| Genes |
2136
|
| mRNA |
2136
|
| misc RNA |
47
|
| rRNA |
3
|
| tRNA |
33
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
87.22 %
|
| CheckM Completeness |
100 %
|
| CheckM Contamination |
0.37 %
|
| CheckM2 Completeness |
100 %
|
| CheckM2 Contamination |
0.42 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM107434v1
|
| GenBank Assembly Accession |
GCA_001074345.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_001074345.1
[NCBI]
|
| BioSample |
SAMN03197981
[NCBI]
|
| BioProject |
PRJNA267549
[NCBI]
|
| Submitter |
University of Washington
|
| Submission Date |
2014-11-17T11:41:35.346
|
| Assembly Method |
|
| Assembly Level |
Scaffold
|
| Sequencing Status |
|
| WGS
Project |
JUTP01
|
| NCBI TaxID |
45634
|
| Isolation Source |
missing
|
| Geo Location |
USA: WA
|
