Genome Meta Information: Granulicatella adiacens 572.rep1_STHE (GCA_001073445.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001073445.1 | ||
| HOMD Taxon-ID | HMT-534 | ||
| Species Name (in use by HOMD) | Granulicatella adiacens | ||
| Organism Name (as deposited) | HMT-534 Granulicatella adiacens 572.rep1_STHE | ||
| Strain or Isolate | 572.rep1_STHE | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Granulicatella; s__Granulicatella adiacens |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 13.0x | ||
| Contigs |
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| Total Sequence Length | 2,031,571 (bp) | ||
| GC Percentage | 37.52 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/073/445/GCA_001073445.1_ASM107344v1 | ||
| CDS | 1930 | ||
| Genes | 2025 | ||
| mRNA | 2025 | ||
| misc RNA | 33 | ||
| rRNA | 6 | ||
| tRNA | 55 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.45 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.13 % | ||
| CheckM2 Contamination | 0.06 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM107344v1 |
| GenBank Assembly Accession | GCA_001073445.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001073445.1 [NCBI] |
| BioSample | SAMN03197774 [NCBI] |
| BioProject | PRJNA267549 [NCBI] |
| Submitter | University of Washington |
| Submission Date | 2014-11-17T11:41:22.270 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JVBO01 |
| NCBI TaxID | 1725361 |
| Isolation Source | missing |
| Geo Location | USA: WA |
