Genome Meta Information: Streptococcus gordonii IE35 (GCA_000970665.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000970665.2 | ||
| HOMD Taxon-ID | HMT-622 | ||
| Species Name (in use by HOMD) | Streptococcus gordonii | ||
| Organism Name (as deposited) | HMT-622 Streptococcus gordonii IE35 | ||
| Strain or Isolate | IE35 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus gordonii |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 3050.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,190,105 (bp) | ||
| GC Percentage | 40.49 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/970/665/GCA_000970665.2_ASM97066v2 | ||
| CDS | 2065 | ||
| Genes | 2158 | ||
| mRNA | 2158 | ||
| misc RNA | 25 | ||
| rRNA | 9 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.18 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.02 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM97066v2 |
| GenBank Assembly Accession | GCA_000970665.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000970665.2 [NCBI] |
| BioSample | SAMN03445771 [NCBI] |
| BioProject | PRJNA279321 [NCBI] |
| Submitter | University of Madras |
| Submission Date | 2015-03-24T22:50:39.113 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1302 |
| Isolation Source | blood from a patient with infective endocarditis |
| Geo Location | India: Tamil Nadu, Chennai |
