Back To Genome Table
Genome Meta Information:
Acidovorax
temperans
KY4 (GCA_000935585.1)
| HOMD Genome-ID |
GCA_000935585.1
|
| HOMD Taxon-ID |
HMT-216
|
| Species Name (in use by HOMD) |
Acidovorax temperans
|
| Organism Name (as deposited) |
HMT-216 Acidovorax temperans KY4
|
| Strain or Isolate |
KY4
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax;
s__Acidovorax temperans |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
59.0x
|
| Contigs |
Number of Contigs: 141
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
4,475,784 (bp) |
| GC Percentage |
62.89
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/935/585/GCA_000935585.1_ASM93558v1
|
| CDS |
4045
|
| Genes |
4126
|
| mRNA |
4126
|
| misc RNA |
31
|
| rRNA |
4
|
| tRNA |
45
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
95.97 %
|
| CheckM Completeness |
99.68 %
|
| CheckM Contamination |
1.18 %
|
| CheckM2 Completeness |
100 %
|
| CheckM2 Contamination |
0.12 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM93558v1
|
| GenBank Assembly Accession |
GCA_000935585.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_000935585.1
[NCBI]
|
| BioSample |
SAMN03265417
[NCBI]
|
| BioProject |
PRJNA270288
[NCBI]
|
| Submitter |
University of Malaya
|
| Submission Date |
2014-12-14T08:48:48.680
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JXYQ01
|
| NCBI TaxID |
80878
|
| Isolation Source |
lake water
|
| Geo Location |
Malaysia
|
