Genome Meta Information: Hoylesella nanceiensis JCM 15639 (GCA_000613985.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000613985.1 | ||
| HOMD Taxon-ID | HMT-299 | ||
| Species Name (in use by HOMD) | Hoylesella nanceiensis | ||
| Organism Name (as deposited) | HMT-299 Hoylesella nanceiensis JCM 15639 | ||
| Strain or Isolate | JCM 15639 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella nanceiensis |
||
| Sequencing Technology | Ion PGM | ||
| Genome Coverage | 49.0x | ||
| Contigs |
|
||
| Total Sequence Length | 2,647,472 (bp) | ||
| GC Percentage | 38.36 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/613/985/GCA_000613985.1_ASM61398v1 | ||
| CDS | 2250 | ||
| Genes | 2302 | ||
| mRNA | 2302 | ||
| misc RNA | 5 | ||
| rRNA | 3 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 99 % | ||
| CheckM Contamination | 0.34 % | ||
| CheckM2 Completeness | 96.82 % | ||
| CheckM2 Contamination | 0.25 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM61398v1 |
| GenBank Assembly Accession | GCA_000613985.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000613985.1 [NCBI] |
| BioSample | SAMD00015843 [NCBI] |
| BioProject | PRJDB594 [NCBI] |
| Submitter | The University of Tokyo |
| Submission Date | 2014-04-10T13:07:12.056 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | BAKD01 |
| NCBI TaxID | 1122988 |
| Isolation Source | |
| Geo Location | |
