Genome Meta Information: Atopobium minutum BV3Ac4 (GCA_000468815.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000468815.1 | ||
| HOMD Taxon-ID | HMT-674 | ||
| Species Name (in use by HOMD) | Atopobium minutum | ||
| Organism Name (as deposited) | HMT-674 Atopobium minutum BV3Ac4 | ||
| Strain or Isolate | BV3Ac4 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Atopobium; s__Atopobium minutum |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 49.0x | ||
| Contigs |
|
||
| Total Sequence Length | 1,717,627 (bp) | ||
| GC Percentage | 48.73 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/468/815/GCA_000468815.1_AspBV3AC4v1.0 | ||
| CDS | 1576 | ||
| Genes | 1634 | ||
| mRNA | 1634 | ||
| misc RNA | 9 | ||
| rRNA | 3 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.97 % | ||
| CheckM2 Contamination | 0.54 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | AspBV3AC4v1.0 |
| GenBank Assembly Accession | GCA_000468815.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000468815.1 [NCBI] |
| BioSample | SAMN00829142 [NCBI] |
| BioProject | PRJNA89625 [NCBI] |
| Submitter | JCVI |
| Submission Date | 2012-03-20T16:04:02.507 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AWUQ01 |
| NCBI TaxID | 1111121 |
| Isolation Source | |
| Geo Location | |
