Genome Meta Information: Prevotella sp. HMT-314 F0091 (GCA_000467895.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000467895.1 | ||
| HOMD Taxon-ID | HMT-314 | ||
| Species Name (in use by HOMD) | Prevotella sp. HMT-314 | ||
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica F0091 | ||
| Strain or Isolate | F0091 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella sp000467895 |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 125.0x | ||
| Contigs |
|
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| Total Sequence Length | 3,193,725 (bp) | ||
| GC Percentage | 41.39 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/467/895/GCA_000467895.1_ASM46789v1 | ||
| CDS | 2591 | ||
| Genes | 2652 | ||
| mRNA | 2652 | ||
| misc RNA | 14 | ||
| rRNA | 2 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.31 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.95 % | ||
| CheckM2 Contamination | 0.06 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM46789v1 |
| GenBank Assembly Accession | GCA_000467895.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000467895.1 [NCBI] |
| BioSample | SAMN02436813 [NCBI] |
| BioProject | PRJNA173942 [NCBI] |
| Submitter | Washington University |
| Submission Date | 2013-12-04T15:03:54.220 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AWUZ01 |
| NCBI TaxID | 1227276 |
| Isolation Source | subgingival plaque biofilm |
| Geo Location | USA |
