Genome Meta Information: Aggregatibacter actinomycetemcomitans DSM 8324 (GCA_000372365.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000372365.1 | ||
| HOMD Taxon-ID | HMT-531 | ||
| Species Name (in use by HOMD) | Aggregatibacter actinomycetemcomitans | ||
| Organism Name (as deposited) | HMT-531 Aggregatibacter actinomycetemcomitans DSM 8324 | ||
| Strain or Isolate | DSM 8324 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter; s__Aggregatibacter actinomycetemcomitans |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | |||
| Contigs |
|
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| Total Sequence Length | 2,085,887 (bp) | ||
| GC Percentage | 44.42 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/372/365/GCA_000372365.1_ASM37236v1 | ||
| CDS | 2016 | ||
| Genes | 2128 | ||
| mRNA | 2128 | ||
| misc RNA | 57 | ||
| rRNA | 7 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.77 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.02 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM37236v1 |
| GenBank Assembly Accession | GCA_000372365.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000372365.1 [NCBI] |
| BioSample | SAMN02256508 [NCBI] |
| BioProject | PRJNA165361 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2013-07-17T10:56:20.006 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AQUU01 |
| NCBI TaxID | 1120957 |
| Isolation Source | abscess |
| Geo Location | Denmark |
