Genome Meta Information: Alloiococcus otitis ATCC 51267 (GCA_000315445.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000315445.1 | ||
| HOMD Taxon-ID | HMT-831 | ||
| Species Name (in use by HOMD) | Alloiococcus otitis | ||
| Organism Name (as deposited) | HMT-831 Alloiococcus otitis ATCC 51267 | ||
| Strain or Isolate | ATCC 51267 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alloiococcus; s__Alloiococcus otitis |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 115.0x | ||
| Contigs |
|
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| Total Sequence Length | 1,806,596 (bp) | ||
| GC Percentage | 45.29 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/315/445/GCA_000315445.1_Allo_otit_ATCC_51267_V1 | ||
| CDS | 1618 | ||
| Genes | 1730 | ||
| mRNA | 1730 | ||
| misc RNA | 50 | ||
| rRNA | 9 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 97.28 % | ||
| CheckM Contamination | 0.54 % | ||
| CheckM2 Completeness | 96.98 % | ||
| CheckM2 Contamination | 0.62 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Allo_otit_ATCC_51267_V1 |
| GenBank Assembly Accession | GCA_000315445.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000315445.1 [NCBI] |
| BioSample | SAMN02463901 [NCBI] |
| BioProject | PRJNA52161 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:52.643 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AGXA01 |
| NCBI TaxID | 883081 |
| Isolation Source | |
| Geo Location | not determined |
