Genome Meta Information: Actinomyces massiliensis 4401292 (GCA_000269805.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000269805.1 | ||
| HOMD Taxon-ID | HMT-852 | ||
| Species Name (in use by HOMD) | Actinomyces massiliensis | ||
| Organism Name (as deposited) | HMT-852 Actinomyces massiliensis 4401292 | ||
| Strain or Isolate | 4401292 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces massiliensis |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 40.0x | ||
| Contigs |
|
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| Total Sequence Length | 3,371,034 (bp) | ||
| GC Percentage | 67.99 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/269/805/GCA_000269805.1_ASM26980v1 | ||
| CDS | 2801 | ||
| Genes | 2878 | ||
| mRNA | 2878 | ||
| misc RNA | 21 | ||
| rRNA | 3 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.96 % | ||
| CheckM Contamination | 2.19 % | ||
| CheckM2 Completeness | 99.98 % | ||
| CheckM2 Contamination | 0.58 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM26980v1 |
| GenBank Assembly Accession | GCA_000269805.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000269805.1 [NCBI] |
| BioSample | SAMN02469892 [NCBI] |
| BioProject | PRJNA127369 [NCBI] |
| Submitter | URMITE |
| Submission Date | 2013-12-19T13:09:40.850 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | AKIO01 |
| NCBI TaxID | 1167628 |
| Isolation Source | patient blood culture |
| Geo Location | France: Marseille |
