Genome Meta Information: Hoylesella nanceiensis F0039 (GCA_000163055.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000163055.2 | ||
| HOMD Taxon-ID | HMT-299 | ||
| Species Name (in use by HOMD) | Hoylesella nanceiensis | ||
| Organism Name (as deposited) | HMT-299 Hoylesella nanceiensis F0039 | ||
| Strain or Isolate | F0039 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella sp000163055 |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 20.2x | ||
| Contigs |
|
||
| Total Sequence Length | 2,480,269 (bp) | ||
| GC Percentage | 37.5 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/055/GCA_000163055.2_ASM16305v2 | ||
| CDS | 1984 | ||
| Genes | 2051 | ||
| mRNA | 2051 | ||
| misc RNA | 5 | ||
| rRNA | 12 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.99 % | ||
| CheckM Contamination | 0.12 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.16 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16305v2 |
| GenBank Assembly Accession | GCA_000163055.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000163055.2 [NCBI] |
| BioSample | SAMN02463807 [NCBI] |
| BioProject | PRJNA40047 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:41.870 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 575614 |
| Isolation Source | |
| Geo Location | not determined |
