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Genome Meta Information:
Prevotella melaninogenica D18 (GCA_000163035.1)
| HOMD Genome-ID | GCA_000163035.1 |
| HOMD Taxon-ID |
HMT-469
|
| Species Name (in use by HOMD) | Prevotella melaninogenica |
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica D18 |
| Strain or Isolate | D18 |
| GTDB Taxonomy | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella melaninogenica_D |
| Sequencing Technology | |
| Genome Coverage | |
| Contigs |
Number of Contigs: 173
|
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|
|
| Total Sequence Length | 3,292,341 (bp) |
| GC Percentage | 42.28 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/035/GCA_000163035.1_ASM16303v1 |
| CDS | 2598 |
| Genes | 2662 |
| mRNA | 2662 |
| misc RNA | 12 |
| rRNA | 4 |
| tRNA | 47 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
View in Anvi`o: Prevotella__melaninogenica__HMT_469
(Interactive)
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|
| Genome Assembly Name | ASM16303v1 |
| GenBank Assembly Accession |
GCA_000163035.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_000163035.1
[NCBI]
|
| BioSample |
SAMN02463806
[NCBI]
|
| BioProject |
PRJNA40045
[NCBI]
|
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:41.760 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | live |
| WGS Project |
ACWY01
|
| NCBI TaxID |
575612
|
| Isolation Source | missing |
| Geo Location | not determined |
| ANI (Average Nucluotide Identity) | 95.52 % |
| CheckM Completeness | 97 % |
| CheckM Percentile | 93.333336 % |
| CheckM Contamination | 0.67 % |
|
