Genome Meta Information: Prevotella melaninogenica D18 (GCA_000163035.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000163035.1 | ||
| HOMD Taxon-ID | HMT-469 | ||
| Species Name (in use by HOMD) | Prevotella melaninogenica | ||
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica D18 | ||
| Strain or Isolate | D18 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella melaninogenica_D |
||
| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
|
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| Total Sequence Length | 3,292,341 (bp) | ||
| GC Percentage | 42.28 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/163/035/GCA_000163035.1_ASM16303v1 | ||
| CDS | 2598 | ||
| Genes | 2662 | ||
| mRNA | 2662 | ||
| misc RNA | 12 | ||
| rRNA | 4 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.52 % | ||
| CheckM Completeness | 98.99 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.95 % | ||
| CheckM2 Contamination | 0.01 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM16303v1 |
| GenBank Assembly Accession | GCA_000163035.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000163035.1 [NCBI] |
| BioSample | SAMN02463806 [NCBI] |
| BioProject | PRJNA40045 [NCBI] |
| Submitter | Broad Institute |
| Submission Date | 2013-12-18T11:11:41.760 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | ACWY01 |
| NCBI TaxID | 575612 |
| Isolation Source | missing |
| Geo Location | not determined |
