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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Lacticaseibacillus paracasei W56 (SEQF7141.1)
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PROKKA Annotation for SEQF7141.1
Genome selected: Lacticaseibacillus paracasei W56
Contigs:2 Bases:3132096 bps
CDS:3145 rRNA:15
tmRNA:1 tRNA:60
Annotation Table [page:7]
Number of Records Found: 3145 [7 Pages]
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# Molecule PID Genome
Viewer
NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
3001 SEQF7141.1_HE970764.1 SEQF7141.1_03107 open 474 [NA] 157 [AA] 2997559-2998032 hypothetical protein
3002 SEQF7141.1_HE970764.1 SEQF7141.1_03108 open 1566 [NA] 521 [AA] 2998022-2999587 hypothetical protein
3003 SEQF7141.1_HE970764.1 SEQF7141.1_03109 open 777 [NA] 258 [AA] 2999577-3000353 hypothetical protein
3004 SEQF7141.1_HE970764.1 SEQF7141.1_03110 open 870 [NA] 289 [AA] 3000451-3001320 putative ketoamine kinase
3005 SEQF7141.1_HE970764.1 SEQF7141.1_03111 open 741 [NA] 246 [AA] 3001437-3002177 glnQ_4 Glutamine transport ATP-binding protein GlnQ
3006 SEQF7141.1_HE970764.1 SEQF7141.1_03112 open 1467 [NA] 488 [AA] 3002174-3003640 mltF_3 Membrane-bound lytic murein transglycosylase F
3007 SEQF7141.1_HE970764.1 SEQF7141.1_03113 open 1461 [NA] 486 [AA] 3003826-3005286 mltF_4 Membrane-bound lytic murein transglycosylase F
3008 SEQF7141.1_HE970764.1 SEQF7141.1_03114 open 549 [NA] 182 [AA] 3005494-3006042 ydaF Putative ribosomal N-acetyltransferase YdaF
3009 SEQF7141.1_HE970764.1 SEQF7141.1_03115 open 624 [NA] 207 [AA] 3006150-3006773 hypothetical protein
3010 SEQF7141.1_HE970764.1 SEQF7141.1_03116 open 417 [NA] 138 [AA] 3007139-3007555 hypothetical protein
3011 SEQF7141.1_HE970764.1 SEQF7141.1_03117 open 501 [NA] 166 [AA] 3007573-3008073 hypothetical protein
3012 SEQF7141.1_HE970764.1 SEQF7141.1_03118 open 993 [NA] 330 [AA] 3008078-3009070 hypothetical protein
3013 SEQF7141.1_HE970764.1 SEQF7141.1_03119 open 474 [NA] 157 [AA] 3009063-3009536 hypothetical protein
3014 SEQF7141.1_HE970764.1 SEQF7141.1_03120 open 1746 [NA] 581 [AA] 3009479-3011224 hypothetical protein
3015 SEQF7141.1_HE970764.1 SEQF7141.1_03121 open 1110 [NA] 369 [AA] 3011704-3012813 mshA D-inositol-3-phosphate glycosyltransferase
3016 SEQF7141.1_HE970764.1 SEQF7141.1_03122 open 648 [NA] 215 [AA] 3012979-3013626 maa Maltose O-acetyltransferase
3017 SEQF7141.1_HE970764.1 SEQF7141.1_03123 open 795 [NA] 264 [AA] 3013649-3014443 ybjI_2 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YbjI
3018 SEQF7141.1_HE970764.1 SEQF7141.1_03124 open 1395 [NA] 464 [AA] 3014583-3015977 aspA Aspartate ammonia-lyase
3019 SEQF7141.1_HE970764.1 SEQF7141.1_03125 open 585 [NA] 194 [AA] 3016132-3016716 hypothetical protein
3020 SEQF7141.1_HE970764.1 SEQF7141.1_03126 open 420 [NA] 139 [AA] 3016828-3017247 hypothetical protein
3021 SEQF7141.1_HE970764.1 SEQF7141.1_03128 open 1179 [NA] 392 [AA] 3017906-3019084 NAD-dependent malic enzyme
3022 SEQF7141.1_HE970764.1 SEQF7141.1_03129 open 1326 [NA] 441 [AA] 3019277-3020602 cimH Citratemalate transporter
3023 SEQF7141.1_HE970764.1 SEQF7141.1_03130 open 1545 [NA] 514 [AA] 3020755-3022299 dcuS Sensor histidine kinase DcuS
3024 SEQF7141.1_HE970764.1 SEQF7141.1_03131 open 690 [NA] 229 [AA] 3022277-3022966 dcuR Transcriptional regulatory protein DcuR
3025 SEQF7141.1_HE970764.1 SEQF7141.1_03132 open 858 [NA] 285 [AA] 3023221-3024078 3-sulfolactaldehyde reductase
3026 SEQF7141.1_HE970764.1 SEQF7141.1_03133 open 510 [NA] 169 [AA] 3024336-3024845 hypothetical protein
3027 SEQF7141.1_HE970764.1 SEQF7141.1_03134 open 399 [NA] 132 [AA] 3024965-3025363 hypothetical protein
3028 SEQF7141.1_HE970764.1 SEQF7141.1_03135 open 1299 [NA] 432 [AA] 3025554-3026852 putative transporter
3029 SEQF7141.1_HE970764.1 SEQF7141.1_03136 open 930 [NA] 309 [AA] 3026933-3027862 hypothetical protein
3030 SEQF7141.1_HE970764.1 SEQF7141.1_03137 open 870 [NA] 289 [AA] 3028205-3029074 Int-Tn Transposase from transposon Tn916
3031 SEQF7141.1_HE970764.1 SEQF7141.1_03138 open 258 [NA] 85 [AA] 3029104-3029361 hypothetical protein
3032 SEQF7141.1_HE970764.1 SEQF7141.1_03139 open 639 [NA] 212 [AA] 3029474-3030112 hypothetical protein
3033 SEQF7141.1_HE970764.1 SEQF7141.1_03140 open 276 [NA] 91 [AA] 3030280-3030555 hypothetical protein
3034 SEQF7141.1_HE970764.1 SEQF7141.1_03141 open 222 [NA] 73 [AA] 3030623-3030844 hypothetical protein
3035 SEQF7141.1_HE970764.1 SEQF7141.1_03142 open 138 [NA] 45 [AA] 3030837-3030974 hypothetical protein
3036 SEQF7141.1_HE970764.1 SEQF7141.1_03143 open 192 [NA] 63 [AA] 3030955-3031146 hypothetical protein
3037 SEQF7141.1_HE970764.1 SEQF7141.1_03144 open 291 [NA] 96 [AA] 3031193-3031483 hypothetical protein
3038 SEQF7141.1_HE970764.1 SEQF7141.1_03145 open 186 [NA] 61 [AA] 3031483-3031668 hypothetical protein
3039 SEQF7141.1_HE970764.1 SEQF7141.1_03146 open 813 [NA] 270 [AA] 3031652-3032464 hypothetical protein
3040 SEQF7141.1_HE970764.1 SEQF7141.1_03147 open 1587 [NA] 528 [AA] 3032477-3034063 hypothetical protein
3041 SEQF7141.1_HE970764.1 SEQF7141.1_03148 open 336 [NA] 111 [AA] 3034389-3034724 hypothetical protein
3042 SEQF7141.1_HE970764.1 SEQF7141.1_03149 open 186 [NA] 61 [AA] 3034729-3034914 hypothetical protein
3043 SEQF7141.1_HE970764.1 SEQF7141.1_03150 open 423 [NA] 140 [AA] 3034911-3035333 hypothetical protein
3044 SEQF7141.1_HE970764.1 SEQF7141.1_03151 open 471 [NA] 156 [AA] 3035450-3035920 hypothetical protein
3045 SEQF7141.1_HE970764.1 SEQF7141.1_03152 open 1704 [NA] 567 [AA] 3035917-3037620 hypothetical protein
3046 SEQF7141.1_HE970764.1 SEQF7141.1_03153 open 180 [NA] 59 [AA] 3037586-3037765 hypothetical protein
3047 SEQF7141.1_HE970764.1 SEQF7141.1_03154 open 1182 [NA] 393 [AA] 3037770-3038951 hypothetical protein
3048 SEQF7141.1_HE970764.1 SEQF7141.1_03155 open 1557 [NA] 518 [AA] 3038938-3040494 hypothetical protein
3049 SEQF7141.1_HE970764.1 SEQF7141.1_03156 open 294 [NA] 97 [AA] 3040549-3040842 hypothetical protein
3050 SEQF7141.1_HE970764.1 SEQF7141.1_03157 open 141 [NA] 46 [AA] 3041300-3041440 hypothetical protein
3051 SEQF7141.1_HE970764.1 SEQF7141.1_03158 open 249 [NA] 82 [AA] 3041456-3041704 hypothetical protein
3052 SEQF7141.1_HE970764.1 SEQF7141.1_03160 open 921 [NA] 306 [AA] 3042396-3043316 prs_2 Ribose-phosphate pyrophosphokinase
3053 SEQF7141.1_HE970764.1 SEQF7141.1_03161 open 930 [NA] 309 [AA] 3043516-3044445 hypothetical protein
3054 SEQF7141.1_HE970764.1 SEQF7141.1_03162 open 957 [NA] 318 [AA] 3044543-3045499 hypothetical protein
3055 SEQF7141.1_HE970764.1 SEQF7141.1_03163 open 1155 [NA] 384 [AA] 3045617-3046771 mtlD_3 Mannitol-1-phosphate 5-dehydrogenase
3056 SEQF7141.1_HE970764.1 SEQF7141.1_03164 open 444 [NA] 147 [AA] 3046775-3047218 mtlF Mannitol-specific phosphotransferase enzyme IIA component
3057 SEQF7141.1_HE970764.1 SEQF7141.1_03165 open 2058 [NA] 685 [AA] 3047223-3049280 mtlR Transcriptional regulator MtlR
3058 SEQF7141.1_HE970764.1 SEQF7141.1_03166 open 1827 [NA] 608 [AA] 3049317-3051143 hypothetical protein
3059 SEQF7141.1_HE970764.1 SEQF7141.1_03167 open 711 [NA] 236 [AA] 3051545-3052255 nagB Glucosamine-6-phosphate deaminase
3060 SEQF7141.1_HE970764.1 SEQF7141.1_03168 open 726 [NA] 241 [AA] 3052611-3053336 Putative bifunctional phosphatasepeptidyl-prolyl cis-trans isomerase
3061 SEQF7141.1_HE970764.1 SEQF7141.1_03169 open 261 [NA] 86 [AA] 3053679-3053939 hypothetical protein
3062 SEQF7141.1_HE970764.1 SEQF7141.1_03170 open 177 [NA] 58 [AA] 3053950-3054126 hypothetical protein
3063 SEQF7141.1_HE970764.1 SEQF7141.1_03171 open 1065 [NA] 354 [AA] 3054697-3055761 hypothetical protein
3064 SEQF7141.1_HE970764.1 SEQF7141.1_03172 open 690 [NA] 229 [AA] 3055754-3056443 yknY putative ABC transporter ATP-binding protein YknY
3065 SEQF7141.1_HE970764.1 SEQF7141.1_03173 open 1191 [NA] 396 [AA] 3056430-3057620 macB Macrolide export ATP-bindingpermease protein MacB
3066 SEQF7141.1_HE970764.1 SEQF7141.1_03174 open 2019 [NA] 672 [AA] 3057777-3059795 hypothetical protein
3067 SEQF7141.1_HE970764.1 SEQF7141.1_03175 open 3918 [NA] 1305 [AA] 3059820-3063737 hypothetical protein
3068 SEQF7141.1_HE970764.1 SEQF7141.1_03176 open 1086 [NA] 361 [AA] 3064377-3065462 hcxA Hydroxycarboxylate dehydrogenase A
3069 SEQF7141.1_HE970764.1 SEQF7141.1_03177 open 1200 [NA] 399 [AA] 3065606-3066805 scmP N-acetylcysteine deacetylase
3070 SEQF7141.1_HE970764.1 SEQF7141.1_03178 open 489 [NA] 162 [AA] 3066802-3067290 hypothetical protein
3071 SEQF7141.1_HE970764.1 SEQF7141.1_03179 open 765 [NA] 254 [AA] 3067292-3068056 hypothetical protein
3072 SEQF7141.1_HE970764.1 SEQF7141.1_03180 open 1902 [NA] 633 [AA] 3068689-3070590 mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
3073 SEQF7141.1_HE970764.1 SEQF7141.1_03181 open 1389 [NA] 462 [AA] 3070632-3072020 mnmE tRNA modification GTPase MnmE
3074 SEQF7141.1_HE970764.1 SEQF7141.1_03182 open 204 [NA] 67 [AA] 3072122-3072325 hypothetical protein
3075 SEQF7141.1_HE970764.1 SEQF7141.1_03183 open 702 [NA] 233 [AA] 3072462-3073163 hypothetical protein
3076 SEQF7141.1_HE970764.1 SEQF7141.1_03184 open 927 [NA] 308 [AA] 3073153-3074079 misCA Membrane protein insertase MisCA
3077 SEQF7141.1_HE970764.1 SEQF7141.1_03185 open 525 [NA] 174 [AA] 3074224-3074748 rnpA Ribonuclease P protein component
3078 SEQF7141.1_HE970764.1 SEQF7141.1_03186 open 141 [NA] 46 [AA] 3074909-3075049 rpmH 50S ribosomal protein L34
3079 SEQF7141.1_HE970765.1 SEQF7141.1_03188 open 1392 [NA] 463 [AA] 781-2172 hypothetical protein
3080 SEQF7141.1_HE970765.1 SEQF7141.1_03189 open 2208 [NA] 735 [AA] 2217-4424 hypothetical protein
3081 SEQF7141.1_HE970765.1 SEQF7141.1_03190 open 402 [NA] 133 [AA] 4396-4797 hypothetical protein
3082 SEQF7141.1_HE970765.1 SEQF7141.1_03191 open 249 [NA] 82 [AA] 4794-5042 hypothetical protein
3083 SEQF7141.1_HE970765.1 SEQF7141.1_03192 open 276 [NA] 91 [AA] 5039-5314 hypothetical protein
3084 SEQF7141.1_HE970765.1 SEQF7141.1_03193 open 975 [NA] 324 [AA] 5402-6376 hypothetical protein
3085 SEQF7141.1_HE970765.1 SEQF7141.1_03194 open 1146 [NA] 381 [AA] 6394-7539 hypothetical protein
3086 SEQF7141.1_HE970765.1 SEQF7141.1_03195 open 231 [NA] 76 [AA] 7575-7805 hypothetical protein
3087 SEQF7141.1_HE970765.1 SEQF7141.1_03196 open 525 [NA] 174 [AA] 7823-8347 hypothetical protein
3088 SEQF7141.1_HE970765.1 SEQF7141.1_03197 open 2478 [NA] 825 [AA] 8361-10838 hypothetical protein
3089 SEQF7141.1_HE970765.1 SEQF7141.1_03198 open 2457 [NA] 818 [AA] 10828-13284 hypothetical protein
3090 SEQF7141.1_HE970765.1 SEQF7141.1_03199 open 372 [NA] 123 [AA] 13232-13603 hypothetical protein
3091 SEQF7141.1_HE970765.1 SEQF7141.1_03200 open 834 [NA] 277 [AA] 13621-14454 hypothetical protein
3092 SEQF7141.1_HE970765.1 SEQF7141.1_03201 open 207 [NA] 68 [AA] 14474-14680 hypothetical protein
3093 SEQF7141.1_HE970765.1 SEQF7141.1_03202 open 1896 [NA] 631 [AA] 14698-16593 hypothetical protein
3094 SEQF7141.1_HE970765.1 SEQF7141.1_03203 open 477 [NA] 158 [AA] 16593-17069 hypothetical protein
3095 SEQF7141.1_HE970765.1 SEQF7141.1_03204 open 1524 [NA] 507 [AA] 17088-18611 hypothetical protein
3096 SEQF7141.1_HE970765.1 SEQF7141.1_03205 open 267 [NA] 88 [AA] 18635-18901 hypothetical protein
3097 SEQF7141.1_HE970765.1 SEQF7141.1_03206 open 279 [NA] 92 [AA] 18913-19191 hypothetical protein
3098 SEQF7141.1_HE970765.1 SEQF7141.1_03207 open 159 [NA] 52 [AA] 19400-19558 hypothetical protein
3099 SEQF7141.1_HE970765.1 SEQF7141.1_03208 open 189 [NA] 62 [AA] 19571-19759 hypothetical protein
3100 SEQF7141.1_HE970765.1 SEQF7141.1_03209 open 684 [NA] 227 [AA] 19848-20531 IS6 family transposase ISLmo3
3101 SEQF7141.1_HE970765.1 SEQF7141.1_03210 open 741 [NA] 246 [AA] 20606-21346 larB Pyridinium-3%2C5-biscarboxylic acid mononucleotide synthase
3102 SEQF7141.1_HE970765.1 SEQF7141.1_03211 open 792 [NA] 263 [AA] 21377-22168 larC_1 Pyridinium-3%2C5-bisthiocarboxylic acid mononucleotide nickel insertion protein
3103 SEQF7141.1_HE970765.1 SEQF7141.1_03212 open 432 [NA] 143 [AA] 22207-22638 larC_2 Pyridinium-3%2C5-bisthiocarboxylic acid mononucleotide nickel insertion protein
3104 SEQF7141.1_HE970765.1 SEQF7141.1_03213 open 717 [NA] 238 [AA] 22643-23359 larD DL-lactic acid transporter
3105 SEQF7141.1_HE970765.1 SEQF7141.1_03214 open 831 [NA] 276 [AA] 23384-24214 larE Pyridinium-3%2C5-bisthiocarboxylic acid mononucleotide synthase
3106 SEQF7141.1_HE970765.1 SEQF7141.1_03215 open 684 [NA] 227 [AA] 24551-25234 IS6 family transposase ISLmo3
3107 SEQF7141.1_HE970765.1 SEQF7141.1_03216 open 924 [NA] 307 [AA] 25294-26217 hypothetical protein
3108 SEQF7141.1_HE970765.1 SEQF7141.1_03217 open 318 [NA] 105 [AA] 26223-26540 hypothetical protein
3109 SEQF7141.1_HE970765.1 SEQF7141.1_03218 open 471 [NA] 156 [AA] 26589-27059 IS5 family transposase ISCaa8
3110 SEQF7141.1_HE970765.1 SEQF7141.1_03219 open 321 [NA] 106 [AA] 27056-27376 hypothetical protein
3111 SEQF7141.1_HE970765.1 SEQF7141.1_03220 open 627 [NA] 208 [AA] 27444-28070 hypothetical protein
3112 SEQF7141.1_HE970765.1 SEQF7141.1_03221 open 1617 [NA] 538 [AA] 28067-29683 hypothetical protein
3113 SEQF7141.1_HE970765.1 SEQF7141.1_03222 open 2598 [NA] 865 [AA] 29697-32294 hypothetical protein
3114 SEQF7141.1_HE970765.1 SEQF7141.1_03223 open 573 [NA] 190 [AA] 32291-32863 hsdR_2 Type-1 restriction enzyme R protein
3115 SEQF7141.1_HE970765.1 SEQF7141.1_03224 open 912 [NA] 303 [AA] 33606-34517 cysM Cysteine synthase
3116 SEQF7141.1_HE970765.1 SEQF7141.1_03225 open 1185 [NA] 394 [AA] 34539-35723 metB_2 Cystathionine gamma-synthase
3117 SEQF7141.1_HE970765.1 SEQF7141.1_03226 open 558 [NA] 185 [AA] 35689-36246 cysE_2 Serine acetyltransferase
3118 SEQF7141.1_HE970765.1 SEQF7141.1_03227 open 123 [NA] 40 [AA] 36251-36373 hypothetical protein
3119 SEQF7141.1_HE970765.1 SEQF7141.1_03228 open 285 [NA] 94 [AA] 36435-36719 ligA_2 DNA ligase
3120 SEQF7141.1_HE970765.1 SEQF7141.1_03229 open 651 [NA] 216 [AA] 36725-37375 bin3_2 Putative transposon Tn552 DNA-invertase bin3
3121 SEQF7141.1_HE970765.1 SEQF7141.1_03230 open 468 [NA] 155 [AA] 37649-38116 hypothetical protein
3122 SEQF7141.1_HE970765.1 SEQF7141.1_03231 open 282 [NA] 93 [AA] 38513-38794 IS5 family transposase ISLrh3
3123 SEQF7141.1_HE970765.1 SEQF7141.1_03232 open 585 [NA] 194 [AA] 38839-39423 hypothetical protein
3124 SEQF7141.1_HE970765.1 SEQF7141.1_03233 open 252 [NA] 83 [AA] 39696-39947 IS3 family transposase IS153
3125 SEQF7141.1_HE970765.1 SEQF7141.1_03234 open 4764 [NA] 1587 [AA] 40272-45035 hypothetical protein
3126 SEQF7141.1_HE970765.1 SEQF7141.1_03235 open 159 [NA] 52 [AA] 45152-45310 hypothetical protein
3127 SEQF7141.1_HE970765.1 SEQF7141.1_03236 open 282 [NA] 93 [AA] 45513-45794 IS3 family transposase ISL1
3128 SEQF7141.1_HE970765.1 SEQF7141.1_03237 open 816 [NA] 271 [AA] 45860-46675 IS3 family transposase ISL1
3129 SEQF7141.1_HE970765.1 SEQF7141.1_03238 open 111 [NA] 36 [AA] 46658-46768 hypothetical protein
3130 SEQF7141.1_HE970765.1 SEQF7141.1_03239 open 318 [NA] 105 [AA] 46911-47228 hypothetical protein
3131 SEQF7141.1_HE970765.1 SEQF7141.1_03240 open 384 [NA] 127 [AA] 47422-47805 hypothetical protein
3132 SEQF7141.1_HE970765.1 SEQF7141.1_03241 open 1293 [NA] 430 [AA] 47802-49094 dinB_3 DNA polymerase IV
3133 SEQF7141.1_HE970765.1 SEQF7141.1_03242 open 342 [NA] 113 [AA] 49087-49428 hypothetical protein
3134 SEQF7141.1_HE970765.1 SEQF7141.1_03243 open 390 [NA] 129 [AA] 49473-49862 hypothetical protein
3135 SEQF7141.1_HE970765.1 SEQF7141.1_03244 open 837 [NA] 278 [AA] 49855-50691 soj_2 Sporulation initiation inhibitor protein Soj
3136 SEQF7141.1_HE970765.1 SEQF7141.1_03245 open 1056 [NA] 351 [AA] 51082-52137 hypothetical protein
3137 SEQF7141.1_HE970765.1 SEQF7141.1_03246 open 738 [NA] 245 [AA] 52127-52864 hypothetical protein
3138 SEQF7141.1_HE970765.1 SEQF7141.1_03247 open 228 [NA] 75 [AA] 53358-53585 hypothetical protein
3139 SEQF7141.1_HE970765.1 SEQF7141.1_03248 open 237 [NA] 78 [AA] 54112-54348 hypothetical protein
3140 SEQF7141.1_HE970765.1 SEQF7141.1_03249 open 219 [NA] 72 [AA] 54356-54574 hypothetical protein
3141 SEQF7141.1_HE970765.1 SEQF7141.1_03250 open 231 [NA] 76 [AA] 54567-54797 hypothetical protein
3142 SEQF7141.1_HE970765.1 SEQF7141.1_03251 open 276 [NA] 91 [AA] 54784-55059 hypothetical protein
3143 SEQF7141.1_HE970765.1 SEQF7141.1_03252 open 99 [NA] 32 [AA] 55098-55196 hypothetical protein
3144 SEQF7141.1_HE970765.1 SEQF7141.1_03253 open 249 [NA] 82 [AA] 55278-55526 hypothetical protein
3145 SEQF7141.1_HE970765.1 SEQF7141.1_03254 open 684 [NA] 227 [AA] 55567-56250 IS6 family transposase ISLmo3