Genome Explorer: Bordetella pertussis I238 (SEQF7946.1)
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NCBI Annotation for SEQF7946.1
| Genome selected: Bordetella pertussis I238 | |||
| Contigs: | 1 | Bases: | 4104580 bps |
| CDS: | 3625 | rRNA: | 9 |
| tmRNA: | 0 | tRNA: | 51 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 3501 | CP011199.1 | AQC19275.1 | open | 1152 [NA] | 383 [AA] | 2106661-2107812 | WU33_10155 | transporter |
| 3502 | CP011199.1 | AQC19276.1 | open | 1158 [NA] | 385 [AA] | 2114211-2115368 | WU33_10195 | transporter |
| 3503 | CP011199.1 | AQC19277.1 | open | 528 [NA] | 175 [AA] | 2141766-2142293 | WU33_10330 | exonuclease |
| 3504 | CP011199.1 | AQC19278.1 | open | 738 [NA] | 245 [AA] | 2154592-2155329 | WU33_10375 | aromatic ring-opening dioxygenase LigB |
| 3505 | CP011199.1 | AQC19279.1 | open | 570 [NA] | 189 [AA] | 2159095-2159664 | WU33_10400 | ferritin |
| 3506 | CP011199.1 | AQC19280.1 | open | 705 [NA] | 234 [AA] | 2159811-2160515 | WU33_10405 | RNA polymerase sigma factor |
| 3507 | CP011199.1 | AQC19281.1 | open | 435 [NA] | 144 [AA] | 2174278-2174712 | WU33_10475 | hypothetical protein |
| 3508 | CP011199.1 | AQC19282.1 | open | 519 [NA] | 172 [AA] | 2181443-2181961 | WU33_10510 | MarR family transcriptional regulator |
| 3509 | CP011199.1 | AQC19283.1 | open | 1413 [NA] | 470 [AA] | 2203481-2204893 | WU33_10595 | phosphoglucomutase |
| 3510 | CP011199.1 | AQC19284.1 | open | 657 [NA] | 218 [AA] | 2205010-2205666 | WU33_10600 | LuxR family transcriptional regulator |
| 3511 | CP011199.1 | AQC19285.1 | open | 294 [NA] | 97 [AA] | 2216035-2216328 | WU33_10650 | ArsR family transcriptional regulator |
| 3512 | CP011199.1 | AQC19286.1 | open | 1119 [NA] | 372 [AA] | 2228025-2229143 | WU33_10725 | ABC transporter substrate-binding protein |
| 3513 | CP011199.1 | AQC19287.1 | open | 795 [NA] | 264 [AA] | 2232527-2233321 | WU33_10750 | hydrolase |
| 3514 | CP011199.1 | AQC19288.1 | open | 510 [NA] | 169 [AA] | 2247385-2247894 | WU33_10830 | hypothetical protein |
| 3515 | CP011199.1 | AQC19289.1 | open | 975 [NA] | 324 [AA] | 2267458-2268432 | WU33_10920 | C4-dicarboxylate ABC transporter substrate-binding protein |
| 3516 | CP011199.1 | AQC19290.1 | open | 1290 [NA] | 429 [AA] | 2309513-2310802 | WU33_11055 | glutamate dehydrogenase |
| 3517 | CP011199.1 | AQC19291.1 | open | 450 [NA] | 149 [AA] | 2340590-2341039 | WU33_11200 | cytidine deaminase |
| 3518 | CP011199.1 | AQC19292.1 | open | 297 [NA] | 98 [AA] | 2351917-2352213 | WU33_11260 | membrane protein |
| 3519 | CP011199.1 | AQC19293.1 | open | 723 [NA] | 240 [AA] | 2358670-2359392 | WU33_11300 | NADPH-dependent FMN reductase |
| 3520 | CP011199.1 | AQC19294.1 | open | 963 [NA] | 320 [AA] | 2362463-2363425 | WU33_11325 | hypothetical protein |
| 3521 | CP011199.1 | AQC19295.1 | open | 624 [NA] | 207 [AA] | 2373386-2374009 | WU33_11380 | glutathione S-transferase |
| 3522 | CP011199.1 | AQC19296.1 | open | 1035 [NA] | 344 [AA] | 2384606-2385640 | WU33_11430 | haloacid dehalogenase |
| 3523 | CP011199.1 | AQC19297.1 | open | 1515 [NA] | 504 [AA] | 2386986-2388500 | WU33_11440 | hypothetical protein |
| 3524 | CP011199.1 | AQC19298.1 | open | 1011 [NA] | 336 [AA] | 2388491-2389501 | WU33_11445 | membrane protein |
| 3525 | CP011199.1 | AQC19299.1 | open | 426 [NA] | 141 [AA] | 2420166-2420591 | WU33_11585 | hypothetical protein |
| 3526 | CP011199.1 | AQC19300.1 | open | 501 [NA] | 166 [AA] | 2425149-2425649 | WU33_11600 | ferritin |
| 3527 | CP011199.1 | AQC19301.1 | open | 642 [NA] | 213 [AA] | 2452680-2453321 | WU33_11715 | nucleoside-triphosphate diphosphatase |
| 3528 | CP011199.1 | AQC19302.1 | open | 2598 [NA] | 865 [AA] | 2479369-2481966 | WU33_11855 | DNA mismatch repair protein MutS |
| 3529 | CP011199.1 | AQC19303.1 | open | 558 [NA] | 185 [AA] | 2483717-2484274 | WU33_11870 | antibiotic biosynthesis monooxygenase |
| 3530 | CP011199.1 | AQC19304.1 | open | 537 [NA] | 178 [AA] | 2492157-2492693 | WU33_11910 | hypothetical protein |
| 3531 | CP011199.1 | AQC19305.1 | open | 2091 [NA] | 696 [AA] | 2495605-2497695 | WU33_11935 | DNA polymerase III subunit gamma/tau |
| 3532 | CP011199.1 | AQC19306.1 | open | 489 [NA] | 162 [AA] | 2510006-2510494 | WU33_11980 | membrane protein |
| 3533 | CP011199.1 | AQC19307.1 | open | 681 [NA] | 226 [AA] | 2550844-2551524 | WU33_12195 | chemotaxis protein CheY |
| 3534 | CP011199.1 | AQC19308.1 | open | 888 [NA] | 295 [AA] | 2605616-2606503 | WU33_12450 | ATP-binding protein |
| 3535 | CP011199.1 | AQC19309.1 | open | 243 [NA] | 80 [AA] | 2616241-2616483 | WU33_12495 | hypothetical protein |
| 3536 | CP011199.1 | AQC19310.1 | open | 420 [NA] | 139 [AA] | 2621481-2621900 | WU33_12520 | Fur family transcriptional regulator |
| 3537 | CP011199.1 | AQC19311.1 | open | 1437 [NA] | 478 [AA] | 2625624-2627060 | WU33_12550 | hypothetical protein |
| 3538 | CP011199.1 | AQC19312.1 | open | 846 [NA] | 281 [AA] | 2640687-2641532 | WU33_12620 | pilus assembly protein |
| 3539 | CP011199.1 | AQC19313.1 | open | 1185 [NA] | 394 [AA] | 2651623-2652807 | WU33_12680 | uroporphyrin-III methyltransferase |
| 3540 | CP011199.1 | AQC19314.1 | open | 1140 [NA] | 379 [AA] | 2675414-2676553 | WU33_12795 | hypothetical protein |
| 3541 | CP011199.1 | AQC19315.1 | open | 900 [NA] | 299 [AA] | 2679626-2680525 | WU33_12815 | recombinase RdgC |
| 3542 | CP011199.1 | AQC19316.1 | open | 435 [NA] | 144 [AA] | 2731681-2732115 | WU33_13100 | aconitase subunit 2 |
| 3543 | CP011199.1 | AQC19317.1 | open | 258 [NA] | 85 [AA] | 2743676-2743933 | WU33_13155 | XRE family transcriptional regulator |
| 3544 | CP011199.1 | AQC19318.1 | open | 1089 [NA] | 362 [AA] | 2765050-2766138 | WU33_13255 | ABC transporter ATP-binding protein |
| 3545 | CP011199.1 | AQC19319.1 | open | 789 [NA] | 262 [AA] | 2767341-2768129 | WU33_13265 | DeoR faimly transcriptional regulator |
| 3546 | CP011199.1 | AQC19320.1 | open | 1020 [NA] | 339 [AA] | 2771469-2772488 | WU33_13285 | hypothetical protein |
| 3547 | CP011199.1 | AQC19321.1 | open | 789 [NA] | 262 [AA] | 2784133-2784921 | WU33_13360 | aldolase |
| 3548 | CP011199.1 | AQC19322.1 | open | 507 [NA] | 168 [AA] | 2813277-2813783 | WU33_13455 | phenylacetate-CoA oxygenase |
| 3549 | CP011199.1 | AQC19323.1 | open | 1422 [NA] | 473 [AA] | 2833863-2835284 | WU33_13560 | argininosuccinate lyase |
| 3550 | CP011199.1 | AQC19324.1 | open | 483 [NA] | 160 [AA] | 2841215-2841697 | WU33_13595 | molybdenum cofactor biosynthesis protein MoaE |
| 3551 | CP011199.1 | AQC19325.1 | open | 504 [NA] | 167 [AA] | 2847607-2848110 | WU33_13625 | peroxiredoxin |
| 3552 | CP011199.1 | AQC19326.1 | open | 1008 [NA] | 335 [AA] | 2850535-2851542 | WU33_13640 | biotin synthase |
| 3553 | CP011199.1 | AQC19327.1 | open | 2001 [NA] | 666 [AA] | 2862783-2864783 | WU33_13705 | cytochrome o ubiquinol oxidase subunit I |
| 3554 | CP011199.1 | AQC19328.1 | open | 2169 [NA] | 722 [AA] | 2894118-2896286 | WU33_13820 | penicillin-binding protein |
| 3555 | CP011199.1 | AQC19329.1 | open | 4566 [NA] | 1521 [AA] | 2896283-2900848 | WU33_13825 | alpha-2-macroglobulin |
| 3556 | CP011199.1 | AQC19330.1 | open | 831 [NA] | 276 [AA] | 2942003-2942833 | WU33_14050 | IclR family transcriptional regulator |
| 3557 | CP011199.1 | AQC19331.1 | open | 912 [NA] | 303 [AA] | 2970275-2971186 | WU33_14180 | hypothetical protein |
| 3558 | CP011199.1 | AQC19332.1 | open | 867 [NA] | 288 [AA] | 2973320-2974186 | WU33_14200 | ABC transporter permease |
| 3559 | CP011199.1 | AQC19333.1 | open | 465 [NA] | 154 [AA] | 2981030-2981494 | WU33_14240 | MerR family transcriptional regulator |
| 3560 | CP011199.1 | AQC19334.1 | open | 741 [NA] | 246 [AA] | 2986213-2986953 | WU33_14265 | oxidoreductase |
| 3561 | CP011199.1 | AQC19335.1 | open | 1347 [NA] | 448 [AA] | 3000000-3001346 | WU33_14335 | MFS transporter |
| 3562 | CP011199.1 | AQC19336.1 | open | 858 [NA] | 285 [AA] | 3040305-3041162 | WU33_14545 | ABC transporter permease |
| 3563 | CP011199.1 | AQC19337.1 | open | 1167 [NA] | 388 [AA] | 3094400-3095566 | WU33_14760 | chromate transporter |
| 3564 | CP011199.1 | AQC19338.1 | open | 2199 [NA] | 732 [AA] | 3097050-3099248 | WU33_14770 | TonB-dependent receptor |
| 3565 | CP011199.1 | AQC19339.1 | open | 1980 [NA] | 659 [AA] | 3105622-3107601 | WU33_14820 | cytochrome o ubiquinol oxidase subunit I |
| 3566 | CP011199.1 | AQC19340.1 | open | 1125 [NA] | 374 [AA] | 3121914-3123038 | WU33_14900 | diaminohydroxyphosphoribosylaminopyrimidine deaminase |
| 3567 | CP011199.1 | AQC19341.1 | open | 429 [NA] | 142 [AA] | 3135664-3136092 | WU33_14970 | 50S ribosomal protein L13 |
| 3568 | CP011199.1 | AQC19342.1 | open | 1407 [NA] | 468 [AA] | 3152221-3153627 | WU33_15045 | glutamyl-tRNA synthetase |
| 3569 | CP011199.1 | AQC19343.1 | open | 942 [NA] | 313 [AA] | 3170772-3171713 | WU33_15125 | sugar kinase |
| 3570 | CP011199.1 | AQC19344.1 | open | 459 [NA] | 152 [AA] | 3184947-3185405 | WU33_15200 | transcriptional regulator |
| 3571 | CP011199.1 | AQC19345.1 | open | 477 [NA] | 158 [AA] | 3225734-3226210 | WU33_15370 | AsnC family transcriptional regulator |
| 3572 | CP011199.1 | AQC19346.1 | open | 306 [NA] | 101 [AA] | 3243720-3244025 | WU33_15465 | RND transporter |
| 3573 | CP011199.1 | AQC19347.1 | open | 939 [NA] | 312 [AA] | 3252110-3253048 | WU33_15520 | nickel transporter |
| 3574 | CP011199.1 | AQC19348.1 | open | 681 [NA] | 226 [AA] | 3270356-3271036 | WU33_15605 | 5-formyltetrahydrofolate cyclo-ligase |
| 3575 | CP011199.1 | AQC19349.1 | open | 2064 [NA] | 687 [AA] | 3271112-3273175 | WU33_15610 | lytic transglycosylase |
| 3576 | CP011199.1 | AQC19350.1 | open | 1479 [NA] | 492 [AA] | 3279677-3281155 | WU33_15640 | hypothetical protein |
| 3577 | CP011199.1 | AQC19351.1 | open | 303 [NA] | 100 [AA] | 3286636-3286938 | WU33_15685 | hypothetical protein |
| 3578 | CP011199.1 | AQC19352.1 | open | 2757 [NA] | 918 [AA] | 3320640-3323396 | WU33_15825 | restriction endonuclease |
| 3579 | CP011199.1 | AQC19353.1 | open | 1896 [NA] | 631 [AA] | 3342515-3344410 | WU33_15920 | sulfatase |
| 3580 | CP011199.1 | AQC19354.1 | open | 432 [NA] | 143 [AA] | 3364886-3365317 | WU33_16005 | peroxiredoxin |
| 3581 | CP011199.1 | AQC19355.1 | open | 618 [NA] | 205 [AA] | 3383546-3384163 | WU33_16090 | urease accessory protein UreJ |
| 3582 | CP011199.1 | AQC19356.1 | open | 972 [NA] | 323 [AA] | 3429903-3430874 | WU33_16325 | ABC transporter substrate-binding protein |
| 3583 | CP011199.1 | AQC19357.1 | open | 867 [NA] | 288 [AA] | 3446026-3446892 | WU33_16400 | multidrug DMT transporter |
| 3584 | CP011199.1 | AQC19358.1 | open | 990 [NA] | 329 [AA] | 3462677-3463666 | WU33_16455 | ABC transporter substrate-binding protein |
| 3585 | CP011199.1 | AQC19359.1 | open | 1767 [NA] | 588 [AA] | 3492518-3494284 | WU33_16610 | peptidase M61 |
| 3586 | CP011199.1 | AQC19360.1 | open | 321 [NA] | 106 [AA] | 3498227-3498547 | WU33_16635 | ABC transporter permease |
| 3587 | CP011199.1 | AQC19361.1 | open | 885 [NA] | 294 [AA] | 3505658-3506542 | WU33_16680 | hypothetical protein |
| 3588 | CP011199.1 | AQC19362.1 | open | 624 [NA] | 207 [AA] | 3526243-3526866 | WU33_16765 | TetR family transcriptional regulator |
| 3589 | CP011199.1 | AQC19363.1 | open | 645 [NA] | 214 [AA] | 3551237-3551881 | WU33_16890 | membrane protein |
| 3590 | CP011199.1 | AQC19364.1 | open | 1287 [NA] | 428 [AA] | 3552377-3553663 | WU33_16900 | membrane protein |
| 3591 | CP011199.1 | AQC19365.1 | open | 231 [NA] | 76 [AA] | 3571540-3571770 | WU33_16990 | hypothetical protein |
| 3592 | CP011199.1 | AQC19366.1 | open | 1803 [NA] | 600 [AA] | 3592662-3594464 | WU33_17090 | isovaleryl-CoA dehydrogenase |
| 3593 | CP011199.1 | AQC19367.1 | open | 981 [NA] | 326 [AA] | 3600743-3601723 | WU33_17115 | oxidoreductase |
| 3594 | CP011199.1 | AQC19368.1 | open | 945 [NA] | 314 [AA] | 3607223-3608167 | WU33_17140 | LysR family transcriptional regulator |
| 3595 | CP011199.1 | AQC19369.1 | open | 963 [NA] | 320 [AA] | 3618733-3619695 | WU33_17190 | LysR family transcriptional regulator |
| 3596 | CP011199.1 | AQC19370.1 | open | 615 [NA] | 204 [AA] | 3668282-3668896 | WU33_17430 | hypothetical protein |
| 3597 | CP011199.1 | AQC19371.1 | open | 585 [NA] | 194 [AA] | 3698919-3699503 | WU33_17570 | hypothetical protein |
| 3598 | CP011199.1 | AQC19372.1 | open | 777 [NA] | 258 [AA] | 3701666-3702442 | WU33_17585 | aspartate dehydrogenase |
| 3599 | CP011199.1 | AQC19373.1 | open | 486 [NA] | 161 [AA] | 3715213-3715698 | WU33_17655 | AsnC family transcriptional regulator |
| 3600 | CP011199.1 | AQC19374.1 | open | 126 [NA] | 41 [AA] | 3746337-3746462 | WU33_17795 | hypothetical protein |
| 3601 | CP011199.1 | AQC19375.1 | open | 972 [NA] | 323 [AA] | 3779358-3780329 | WU33_17995 | ABC transporter substrate-binding protein |
| 3602 | CP011199.1 | AQC19376.1 | open | 204 [NA] | 67 [AA] | 3780414-3780617 | WU33_18000 | hypothetical protein |
| 3603 | CP011199.1 | AQC19377.1 | open | 1608 [NA] | 535 [AA] | 3792539-3794146 | WU33_18060 | methylcrotonoyl-CoA carboxylase |
| 3604 | CP011199.1 | AQC19378.1 | open | 1842 [NA] | 613 [AA] | 3818723-3820564 | WU33_18155 | acetolactate synthase |
| 3605 | CP011199.1 | AQC19379.1 | open | 189 [NA] | 62 [AA] | 3855311-3855499 | WU33_18345 | hypothetical protein |
| 3606 | CP011199.1 | AQC19380.1 | open | 894 [NA] | 297 [AA] | 3868095-3868988 | WU33_18455 | membrane protein |
| 3607 | CP011199.1 | AQC19381.1 | open | 501 [NA] | 166 [AA] | 3887804-3888304 | WU33_18530 | single-stranded DNA-binding protein |
| 3608 | CP011199.1 | AQC19382.1 | open | 504 [NA] | 167 [AA] | 3890697-3891200 | WU33_18540 | hypothetical protein |
| 3609 | CP011199.1 | AQC19383.1 | open | 834 [NA] | 277 [AA] | 3893905-3894738 | WU33_18565 | transcriptional regulator |
| 3610 | CP011199.1 | AQC19384.1 | open | 798 [NA] | 265 [AA] | 3930460-3931257 | WU33_18750 | sulfonate ABC transporter ATP-binding protein |
| 3611 | CP011199.1 | AQC19385.1 | open | 627 [NA] | 208 [AA] | 3936214-3936840 | WU33_18775 | TetR family transcriptional regulator |
| 3612 | CP011199.1 | AQC19386.1 | open | 780 [NA] | 259 [AA] | 3944161-3944940 | WU33_18815 | hypothetical protein |
| 3613 | CP011199.1 | AQC19387.1 | open | 1362 [NA] | 453 [AA] | 3948281-3949642 | WU33_18840 | (Fe-S)-binding protein |
| 3614 | CP011199.1 | AQC19388.1 | open | 222 [NA] | 73 [AA] | 3960503-3960724 | WU33_18895 | hypothetical protein |
| 3615 | CP011199.1 | AQC19389.1 | open | 888 [NA] | 295 [AA] | 3974535-3975422 | WU33_18970 | RNA polymerase factor sigma-32 |
| 3616 | CP011199.1 | AQC19390.1 | open | 246 [NA] | 81 [AA] | 3993349-3993594 | WU33_19050 | BolA family transcriptional regulator |
| 3617 | CP011199.1 | AQC19391.1 | open | 261 [NA] | 86 [AA] | 4008825-4009085 | WU33_19160 | type IV secretion protein VirB2 |
| 3618 | CP011199.1 | AQC19392.1 | open | 819 [NA] | 272 [AA] | 4014150-4014968 | WU33_19190 | type IV secretion protein F |
| 3619 | CP011199.1 | AQC19393.1 | open | 1125 [NA] | 374 [AA] | 4014949-4016073 | WU33_19195 | type IV secretion protein G |
| 3620 | CP011199.1 | AQC19394.1 | open | 645 [NA] | 214 [AA] | 4044149-4044793 | WU33_19315 | dephospho-CoA kinase |
| 3621 | CP011199.1 | AQC19395.1 | open | 1068 [NA] | 355 [AA] | 4064677-4065744 | WU33_19410 | adenine glycosylase |
| 3622 | CP011199.1 | AQC19396.1 | open | 939 [NA] | 312 [AA] | 4068533-4069471 | WU33_19430 | acetyl-CoA acetyltransferase |
| 3623 | CP011199.1 | AQC19397.1 | open | 1233 [NA] | 410 [AA] | 4077454-4078686 | WU33_19475 | formyl-CoA transferase |
| 3624 | CP011199.1 | AQC19398.1 | open | 1440 [NA] | 479 [AA] | 4080315-4081754 | WU33_19490 | catalase |
| 3625 | CP011199.1 | AQC19399.1 | open | 1377 [NA] | 458 [AA] | 4096445-4097821 | WU33_19560 | histidine kinase |