Genome Explorer: Bordetella pertussis J296 (SEQF7932.1)
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NCBI Annotation for SEQF7932.1
| Genome selected: Bordetella pertussis J296 | |||
| Contigs: | 1 | Bases: | 4107428 bps |
| CDS: | 79 | rRNA: | 9 |
| tmRNA: | 0 | tRNA: | 51 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 3501 | CP013863.1 | AQI51884.1 | open | 657 [NA] | 218 [AA] | 2131756-2132412 | AVS81_10180 | helix-turn-helix transcriptional regulator |
| 3502 | CP013863.1 | AQI51885.1 | open | 1398 [NA] | 465 [AA] | 2172145-2173542 | AVS81_10375 | rRNA methyltransferase |
| 3503 | CP013863.1 | AQI51886.1 | open | 1956 [NA] | 651 [AA] | 2198236-2200191 | AVS81_10485 | peptidylprolyl isomerase |
| 3504 | CP013863.1 | AQI51887.1 | open | 636 [NA] | 211 [AA] | 2211879-2212514 | AVS81_10555 | glycerol-3-phosphate acyltransferase |
| 3505 | CP013863.1 | AQI51888.1 | open | 1017 [NA] | 338 [AA] | 2212782-2213798 | AVS81_10560 | transposase |
| 3506 | CP013863.1 | AQI51889.1 | open | 2712 [NA] | 903 [AA] | 2231000-2233711 | AVS81_10645 | autotransporter outer membrane beta-barrel domain-containing protein |
| 3507 | CP013863.1 | AQI51890.1 | open | 699 [NA] | 232 [AA] | 2245281-2245979 | AVS81_10700 | hypothetical protein |
| 3508 | CP013863.1 | AQI51891.1 | open | 267 [NA] | 88 [AA] | 2250823-2251089 | AVS81_10730 | type III secretion protein HrpO |
| 3509 | CP013863.1 | AQI51892.1 | open | 1080 [NA] | 359 [AA] | 2251763-2252842 | AVS81_10740 | type III secretion system protein |
| 3510 | CP013863.1 | AQI51893.1 | open | 564 [NA] | 187 [AA] | 2255232-2255795 | AVS81_10760 | type III secretion system protein |
| 3511 | CP013863.1 | AQI51894.1 | open | 2100 [NA] | 699 [AA] | 2264779-2266878 | AVS81_10835 | Low calcium response locus protein D |
| 3512 | CP013863.1 | AQI51895.1 | open | 291 [NA] | 96 [AA] | 2275080-2275370 | AVS81_10880 | hypothetical protein |
| 3513 | CP013863.1 | AQI51896.1 | open | 1698 [NA] | 565 [AA] | 2280168-2281865 | AVS81_10910 | phosphonate ABC transporter permease |
| 3514 | CP013863.1 | AQI51897.1 | open | 1530 [NA] | 509 [AA] | 2296518-2298047 | AVS81_10985 | DNA-binding protein |
| 3515 | CP013863.1 | AQI51898.1 | open | 1014 [NA] | 337 [AA] | 2306415-2307428 | AVS81_11025 | acetylpolyamine aminohydrolase |
| 3516 | CP013863.1 | AQI51899.1 | open | 1344 [NA] | 447 [AA] | 2313611-2314954 | AVS81_11055 | sodium:alanine symporter |
| 3517 | CP013863.1 | AQI51900.1 | open | 588 [NA] | 195 [AA] | 2319765-2320352 | AVS81_11080 | nicotinate-nicotinamide nucleotide adenylyltransferase |
| 3518 | CP013863.1 | AQI51901.1 | open | 900 [NA] | 299 [AA] | 2351932-2352831 | AVS81_11220 | aspartyl beta-hydroxylase |
| 3519 | CP013863.1 | AQI51902.1 | open | 2472 [NA] | 823 [AA] | 2372600-2375071 | AVS81_11310 | ABC transporter permease |
| 3520 | CP013863.1 | AQI51903.1 | open | 780 [NA] | 259 [AA] | 2385452-2386231 | AVS81_11375 | GntR family transcriptional regulator |
| 3521 | CP013863.1 | AQI51904.1 | open | 423 [NA] | 140 [AA] | 2395447-2395869 | AVS81_11410 | hypothetical protein |
| 3522 | CP013863.1 | AQI51905.1 | open | 858 [NA] | 285 [AA] | 2431291-2432148 | AVS81_11590 | permease |
| 3523 | CP013863.1 | AQI51906.1 | open | 1539 [NA] | 512 [AA] | 2436257-2437795 | AVS81_11610 | propionate--CoA ligase |
| 3524 | CP013863.1 | AQI51907.1 | open | 936 [NA] | 311 [AA] | 2450152-2451087 | AVS81_11675 | ABC transporter substrate-binding protein |
| 3525 | CP013863.1 | AQI51908.1 | open | 1044 [NA] | 347 [AA] | 2453163-2454206 | AVS81_11690 | threonine synthase |
| 3526 | CP013863.1 | AQI51909.1 | open | 240 [NA] | 79 [AA] | 2465821-2466060 | AVS81_11755 | acyl carrier protein |
| 3527 | CP013863.1 | AQI51910.1 | open | 594 [NA] | 197 [AA] | 2470349-2470942 | AVS81_11785 | hypothetical protein |
| 3528 | CP013863.1 | AQI51911.1 | open | 651 [NA] | 216 [AA] | 2487952-2488602 | AVS81_11870 | 3-isopropylmalate dehydratase |
| 3529 | CP013863.1 | AQI51912.1 | open | 2058 [NA] | 685 [AA] | 2500278-2502335 | AVS81_11935 | 4Fe-4S ferredoxin |
| 3530 | CP013863.1 | AQI51913.1 | open | 564 [NA] | 187 [AA] | 2546045-2546608 | AVS81_12160 | outer membrane protein chaperone |
| 3531 | CP013863.1 | AQI51914.1 | open | 477 [NA] | 158 [AA] | 2561678-2562154 | AVS81_12225 | disulfide bond formation protein DsbB |
| 3532 | CP013863.1 | AQI51915.1 | open | 378 [NA] | 125 [AA] | 2566706-2567083 | AVS81_12250 | flagellar protein |
| 3533 | CP013863.1 | AQI51916.1 | open | 735 [NA] | 244 [AA] | 2582446-2583180 | AVS81_12355 | flagellar biosynthesis protein flip |
| 3534 | CP013863.1 | AQI51917.1 | open | 1017 [NA] | 338 [AA] | 2584324-2585340 | AVS81_12370 | transposase |
| 3535 | CP013863.1 | AQI51918.1 | open | 711 [NA] | 236 [AA] | 2601858-2602568 | AVS81_12445 | flagellar biosynthesis protein FlgA |
| 3536 | CP013863.1 | AQI51919.1 | open | 1017 [NA] | 338 [AA] | 2609451-2610467 | AVS81_12475 | transposase |
| 3537 | CP013863.1 | AQI51920.1 | open | 681 [NA] | 226 [AA] | 2626703-2627383 | AVS81_12555 | GntR family transcriptional regulator |
| 3538 | CP013863.1 | AQI51921.1 | open | 3342 [NA] | 1113 [AA] | 2647929-2651270 | AVS81_12650 | alpha-amylase |
| 3539 | CP013863.1 | AQI51922.1 | open | 2544 [NA] | 847 [AA] | 2658705-2661248 | AVS81_12680 | alpha-amylase |
| 3540 | CP013863.1 | AQI51923.1 | open | 327 [NA] | 108 [AA] | 2678018-2678344 | AVS81_12775 | hypothetical protein |
| 3541 | CP013863.1 | AQI51924.1 | open | 276 [NA] | 91 [AA] | 2683044-2683319 | AVS81_12805 | biotin--protein ligase |
| 3542 | CP013863.1 | AQI51925.1 | open | 498 [NA] | 165 [AA] | 2689279-2689776 | AVS81_12845 | hypothetical protein |
| 3543 | CP013863.1 | AQI51926.1 | open | 612 [NA] | 203 [AA] | 2691572-2692183 | AVS81_12865 | alpha/beta hydrolase |
| 3544 | CP013863.1 | AQI51927.1 | open | 1314 [NA] | 437 [AA] | 2696726-2698039 | AVS81_12890 | glycerol-3-phosphate ABC transporter substrate-binding protein |
| 3545 | CP013863.1 | AQI51928.1 | open | 447 [NA] | 148 [AA] | 2705911-2706357 | AVS81_12935 | glutamate racemase |
| 3546 | CP013863.1 | AQI51929.1 | open | 1392 [NA] | 463 [AA] | 2726189-2727580 | AVS81_13010 | serine dehydratase |
| 3547 | CP013863.1 | AQI51930.1 | open | 1005 [NA] | 334 [AA] | 2750010-2751014 | AVS81_13105 | cobalamin biosynthesis protein CobW |
| 3548 | CP013863.1 | AQI51931.1 | open | 456 [NA] | 151 [AA] | 2753708-2754163 | AVS81_13135 | peptidylprolyl isomerase |
| 3549 | CP013863.1 | AQI51932.1 | open | 1662 [NA] | 553 [AA] | 2762999-2764660 | AVS81_13185 | hypothetical protein |
| 3550 | CP013863.1 | AQI51933.1 | open | 948 [NA] | 315 [AA] | 2774072-2775019 | AVS81_13245 | nodulation factor ABC transporter ATP-binding protein NodI |
| 3551 | CP013863.1 | AQI51934.1 | open | 603 [NA] | 200 [AA] | 2797328-2797930 | AVS81_13345 | ADP-ribose pyrophosphatase |
| 3552 | CP013863.1 | AQI51935.1 | open | 432 [NA] | 143 [AA] | 2800278-2800709 | AVS81_13370 | hypothetical protein |
| 3553 | CP013863.1 | AQI51936.1 | open | 975 [NA] | 324 [AA] | 2807532-2808506 | AVS81_13420 | LysR family transcriptional regulator |
| 3554 | CP013863.1 | AQI51937.1 | open | 507 [NA] | 168 [AA] | 2818228-2818734 | AVS81_13470 | phenylacetate-CoA oxygenase subunit PaaJ |
| 3555 | CP013863.1 | AQI51938.1 | open | 1422 [NA] | 473 [AA] | 2838814-2840235 | AVS81_13575 | argininosuccinate lyase |
| 3556 | CP013863.1 | AQI51939.1 | open | 483 [NA] | 160 [AA] | 2846166-2846648 | AVS81_13610 | molybdenum cofactor biosynthesis protein MoaE |
| 3557 | CP013863.1 | AQI51940.1 | open | 504 [NA] | 167 [AA] | 2852558-2853061 | AVS81_13640 | peroxiredoxin |
| 3558 | CP013863.1 | AQI51941.1 | open | 1008 [NA] | 335 [AA] | 2855486-2856493 | AVS81_13655 | biotin synthase |
| 3559 | CP013863.1 | AQI51942.1 | open | 1017 [NA] | 338 [AA] | 2858138-2859154 | AVS81_13670 | transposase |
| 3560 | CP013863.1 | AQI51943.1 | open | 2001 [NA] | 666 [AA] | 2867734-2869734 | AVS81_13720 | cytochrome ubiquinol oxidase subunit I |
| 3561 | CP013863.1 | AQI51944.1 | open | 4566 [NA] | 1521 [AA] | 2901233-2905798 | AVS81_13840 | alpha-2-macroglobulin |
| 3562 | CP013863.1 | AQI51945.1 | open | 831 [NA] | 276 [AA] | 2946953-2947783 | AVS81_14065 | IclR family transcriptional regulator |
| 3563 | CP013863.1 | AQI51946.1 | open | 912 [NA] | 303 [AA] | 2975225-2976136 | AVS81_14195 | hypothetical protein |
| 3564 | CP013863.1 | AQI51947.1 | open | 867 [NA] | 288 [AA] | 2978270-2979136 | AVS81_14215 | ABC transporter permease |
| 3565 | CP013863.1 | AQI51948.1 | open | 741 [NA] | 246 [AA] | 2991163-2991903 | AVS81_14280 | oxidoreductase |
| 3566 | CP013863.1 | AQI51949.1 | open | 1347 [NA] | 448 [AA] | 3004950-3006296 | AVS81_14350 | MFS transporter |
| 3567 | CP013863.1 | AQI51950.1 | open | 858 [NA] | 285 [AA] | 3045255-3046112 | AVS81_14560 | ABC transporter permease |
| 3568 | CP013863.1 | AQI51951.1 | open | 1167 [NA] | 388 [AA] | 3099350-3100516 | AVS81_14775 | chromate transporter |
| 3569 | CP013863.1 | AQI51952.1 | open | 2199 [NA] | 732 [AA] | 3102000-3104198 | AVS81_14785 | TonB-dependent receptor |
| 3570 | CP013863.1 | AQI51953.1 | open | 1980 [NA] | 659 [AA] | 3110572-3112551 | AVS81_14835 | cytochrome ubiquinol oxidase subunit I |
| 3571 | CP013863.1 | AQI51954.1 | open | 1065 [NA] | 354 [AA] | 3120621-3121685 | AVS81_14880 | carnitine dehydratase |
| 3572 | CP013863.1 | AQI51955.1 | open | 1125 [NA] | 374 [AA] | 3126864-3127988 | AVS81_14915 | diaminohydroxyphosphoribosylaminopyrimidine deaminase |
| 3573 | CP013863.1 | AQI51956.1 | open | 429 [NA] | 142 [AA] | 3140615-3141043 | AVS81_14985 | 50S ribosomal protein L13 |
| 3574 | CP013863.1 | AQI51957.1 | open | 1407 [NA] | 468 [AA] | 3157172-3158578 | AVS81_15060 | glutamate--tRNA ligase |
| 3575 | CP013863.1 | AQI51958.1 | open | 942 [NA] | 313 [AA] | 3175723-3176664 | AVS81_15140 | sugar kinase |
| 3576 | CP013863.1 | AQI51959.1 | open | 459 [NA] | 152 [AA] | 3189898-3190356 | AVS81_15215 | transcriptional regulator |
| 3577 | CP013863.1 | AQI51960.1 | open | 987 [NA] | 328 [AA] | 3197998-3198984 | AVS81_15250 | peptidase M23 |
| 3578 | CP013863.1 | AQI51961.1 | open | 429 [NA] | 142 [AA] | 3217462-3217890 | AVS81_15330 | division/cell wall cluster transcriptional repressor MraZ |
| 3579 | CP013863.1 | AQI51962.1 | open | 477 [NA] | 158 [AA] | 3230684-3231160 | AVS81_15385 | AsnC family transcriptional regulator |
| 3580 | CP013863.1 | AQI51963.1 | open | 306 [NA] | 101 [AA] | 3248670-3248975 | AVS81_15480 | RND transporter |
| 3581 | CP013863.1 | AQI51964.1 | open | 939 [NA] | 312 [AA] | 3257060-3257998 | AVS81_15535 | nickel transporter |
| 3582 | CP013863.1 | AQI51965.1 | open | 2064 [NA] | 687 [AA] | 3276062-3278125 | AVS81_15625 | lytic transglycosylase |
| 3583 | CP013863.1 | AQI51966.1 | open | 1479 [NA] | 492 [AA] | 3284627-3286105 | AVS81_15655 | hypothetical protein |
| 3584 | CP013863.1 | AQI51967.1 | open | 366 [NA] | 121 [AA] | 3291586-3291951 | AVS81_15700 | hypothetical protein |
| 3585 | CP013863.1 | AQI51968.1 | open | 2757 [NA] | 918 [AA] | 3325590-3328346 | AVS81_15840 | restriction endonuclease |
| 3586 | CP013863.1 | AQI51969.1 | open | 1896 [NA] | 631 [AA] | 3347465-3349360 | AVS81_15935 | sulfatase |
| 3587 | CP013863.1 | AQI51970.1 | open | 432 [NA] | 143 [AA] | 3369836-3370267 | AVS81_16020 | peroxiredoxin |
| 3588 | CP013863.1 | AQI51971.1 | open | 618 [NA] | 205 [AA] | 3388496-3389113 | AVS81_16105 | urease accessory protein UreJ |
| 3589 | CP013863.1 | AQI51972.1 | open | 1017 [NA] | 338 [AA] | 3432514-3433530 | AVS81_16325 | transposase |
| 3590 | CP013863.1 | AQI51973.1 | open | 1017 [NA] | 338 [AA] | 3447047-3448063 | AVS81_16395 | transposase |
| 3591 | CP013863.1 | AQI51974.1 | open | 867 [NA] | 288 [AA] | 3450976-3451842 | AVS81_16415 | multidrug DMT transporter |
| 3592 | CP013863.1 | AQI51975.1 | open | 1017 [NA] | 338 [AA] | 3465808-3466824 | AVS81_16460 | transposase |
| 3593 | CP013863.1 | AQI51976.1 | open | 990 [NA] | 329 [AA] | 3467627-3468616 | AVS81_16470 | ABC transporter substrate-binding protein |
| 3594 | CP013863.1 | AQI51977.1 | open | 1767 [NA] | 588 [AA] | 3497466-3499232 | AVS81_16625 | peptidase M61 |
| 3595 | CP013863.1 | AQI51978.1 | open | 321 [NA] | 106 [AA] | 3503175-3503495 | AVS81_16650 | ABC transporter permease |
| 3596 | CP013863.1 | AQI51979.1 | open | 885 [NA] | 294 [AA] | 3510606-3511490 | AVS81_16695 | hypothetical protein |
| 3597 | CP013863.1 | AQI51980.1 | open | 624 [NA] | 207 [AA] | 3531191-3531814 | AVS81_16780 | TetR family transcriptional regulator |
| 3598 | CP013863.1 | AQI51981.1 | open | 645 [NA] | 214 [AA] | 3556185-3556829 | AVS81_16905 | hypothetical protein |
| 3599 | CP013863.1 | AQI51982.1 | open | 1287 [NA] | 428 [AA] | 3557325-3558611 | AVS81_16915 | hypothetical protein |
| 3600 | CP013863.1 | AQI51983.1 | open | 231 [NA] | 76 [AA] | 3575439-3575669 | AVS81_17000 | hypothetical protein |
| 3601 | CP013863.1 | AQI51984.1 | open | 390 [NA] | 129 [AA] | 3575796-3576185 | AVS81_17005 | hypothetical protein |
| 3602 | CP013863.1 | AQI51985.1 | open | 981 [NA] | 326 [AA] | 3603593-3604573 | AVS81_17120 | oxidoreductase |
| 3603 | CP013863.1 | AQI51986.1 | open | 945 [NA] | 314 [AA] | 3610073-3611017 | AVS81_17145 | LysR family transcriptional regulator |
| 3604 | CP013863.1 | AQI51987.1 | open | 963 [NA] | 320 [AA] | 3621583-3622545 | AVS81_17195 | LysR family transcriptional regulator |
| 3605 | CP013863.1 | AQI51988.1 | open | 471 [NA] | 156 [AA] | 3670587-3671057 | AVS81_17430 | rRNA methylase |
| 3606 | CP013863.1 | AQI51989.1 | open | 615 [NA] | 204 [AA] | 3671132-3671746 | AVS81_17435 | hypothetical protein |
| 3607 | CP013863.1 | AQI51990.1 | open | 585 [NA] | 194 [AA] | 3701769-3702353 | AVS81_17575 | hypothetical protein |
| 3608 | CP013863.1 | AQI51991.1 | open | 777 [NA] | 258 [AA] | 3704516-3705292 | AVS81_17590 | aspartate dehydrogenase |
| 3609 | CP013863.1 | AQI51992.1 | open | 486 [NA] | 161 [AA] | 3718063-3718548 | AVS81_17660 | AsnC family transcriptional regulator |
| 3610 | CP013863.1 | AQI51993.1 | open | 126 [NA] | 41 [AA] | 3749187-3749312 | AVS81_17800 | hypothetical protein |
| 3611 | CP013863.1 | AQI51994.1 | open | 972 [NA] | 323 [AA] | 3782208-3783179 | AVS81_18000 | ABC transporter substrate-binding protein |
| 3612 | CP013863.1 | AQI51995.1 | open | 1608 [NA] | 535 [AA] | 3795389-3796996 | AVS81_18065 | methylcrotonoyl-CoA carboxylase |
| 3613 | CP013863.1 | AQI51996.1 | open | 1842 [NA] | 613 [AA] | 3821573-3823414 | AVS81_18160 | acetolactate synthase |
| 3614 | CP013863.1 | AQI51997.1 | open | 1017 [NA] | 338 [AA] | 3839368-3840384 | AVS81_18240 | transposase |
| 3615 | CP013863.1 | AQI51998.1 | open | 894 [NA] | 297 [AA] | 3870945-3871838 | AVS81_18460 | hypothetical protein |
| 3616 | CP013863.1 | AQI51999.1 | open | 501 [NA] | 166 [AA] | 3890654-3891154 | AVS81_18535 | single-stranded DNA-binding protein |
| 3617 | CP013863.1 | AQI52000.1 | open | 504 [NA] | 167 [AA] | 3893547-3894050 | AVS81_18545 | hypothetical protein |
| 3618 | CP013863.1 | AQI52001.1 | open | 834 [NA] | 277 [AA] | 3896755-3897588 | AVS81_18570 | transcriptional regulator |
| 3619 | CP013863.1 | AQI52002.1 | open | 627 [NA] | 208 [AA] | 3939063-3939689 | AVS81_18780 | TetR family transcriptional regulator |
| 3620 | CP013863.1 | AQI52003.1 | open | 780 [NA] | 259 [AA] | 3947010-3947789 | AVS81_18820 | hypothetical protein |
| 3621 | CP013863.1 | AQI52004.1 | open | 1362 [NA] | 453 [AA] | 3951130-3952491 | AVS81_18840 | (Fe-S)-binding protein |
| 3622 | CP013863.1 | AQI52005.1 | open | 222 [NA] | 73 [AA] | 3963352-3963573 | AVS81_18895 | hypothetical protein |
| 3623 | CP013863.1 | AQI52006.1 | open | 888 [NA] | 295 [AA] | 3977383-3978270 | AVS81_18970 | RNA polymerase factor sigma-32 |
| 3624 | CP013863.1 | AQI52007.1 | open | 246 [NA] | 81 [AA] | 3996197-3996442 | AVS81_19050 | BolA family transcriptional regulator |
| 3625 | CP013863.1 | AQI52008.1 | open | 1125 [NA] | 374 [AA] | 4017797-4018921 | AVS81_19195 | type IV secretion protein G |
| 3626 | CP013863.1 | AQI52009.1 | open | 753 [NA] | 250 [AA] | 4046203-4046955 | AVS81_19310 | cell division protein ZapD |
| 3627 | CP013863.1 | AQI52010.1 | open | 645 [NA] | 214 [AA] | 4046997-4047641 | AVS81_19315 | dephospho-CoA kinase |
| 3628 | CP013863.1 | AQI52011.1 | open | 1233 [NA] | 410 [AA] | 4080302-4081534 | AVS81_19475 | formyl-CoA transferase |
| 3629 | CP013863.1 | AQI52012.1 | open | 1440 [NA] | 479 [AA] | 4083163-4084602 | AVS81_19490 | catalase |
| 3630 | CP013863.1 | AQI52013.1 | open | 1377 [NA] | 458 [AA] | 4099293-4100669 | AVS81_19560 | histidine kinase |