CRISPRs found in the submitted sequence(s)

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Sequence: SJD2

Sequence description :
Length (bp): 2329548

Number of CRISPRs candidates = 6
Confirmed CRISPRs = 3	Questionable CRISPRs = 3
SJD2_Crispr_1 SJD2_Crispr_3 SJD2_Crispr_4	SJD2_PossibleCrispr_2 SJD2_PossibleCrispr_5 SJD2_PossibleCrispr_6
CRISPRs candidates localization

Rebuild a CRISPR, modify the DR sequence

Confirmed CRISPRs (3)

CRISPR id : tmp_1_Crispr_1

• CRISPR start position : 62571 ---------- CRISPR end position : 63133 ---------- CRISPR length : 562
• DR consensus : GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC
• DR length : 36 Number of spacers : 8

62571	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	CGCTCAAAACGACTCAAGAAAAACAAATGAG	62637
62638	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	TTAGTATGGTTTTTAGTTTAGAAAAGTTCC	62703
62704	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	TCAGACCAACAAAATCCTTCTTACGAGATT	62769
62770	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	TCCATGTACAAATATCCTTCAGACTGCACT	62835
62836	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	TCTCTTGTAGAAGCTGTCACGAAGATGACA	62901
62902	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	AGGCACAGAAAGATTCCGACGCAATTACG	62966
62967	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	GCACGGCGATCGGCTTTTGGACGCTATAA	63031
63032	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC	GGCGAGAAAAGGATTCACCCTTGTCAAAAG	63097
63098	GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC		63133

Display spacers	Crispr Properties

[*]There are two kinds of "questionable" CRISPRs:

• Small CRISPRs, i.e structures having only two or three DRs
• Structures where the repeated motifs (DR in CRISPR) are not 100% identical.