CRISPRs found in the submitted sequence(s)

Sequence: F0185

Sequence description :
Length (bp): 2246368

Number of CRISPRs candidates = 21
Confirmed CRISPRs = 15	Questionable CRISPRs = 6
F0185_Crispr_1 F0185_Crispr_6 F0185_Crispr_7 F0185_Crispr_9 F0185_Crispr_10 F0185_Crispr_11 F0185_Crispr_12 F0185_Crispr_13 F0185_Crispr_14 F0185_Crispr_15 F0185_Crispr_16 F0185_Crispr_17 F0185_Crispr_18 F0185_Crispr_19 F0185_Crispr_20	F0185_PossibleCrispr_2 F0185_PossibleCrispr_3 F0185_PossibleCrispr_4 F0185_PossibleCrispr_5 F0185_PossibleCrispr_8 F0185_PossibleCrispr_21
CRISPRs candidates localization

Rebuild a CRISPR, modify the DR sequence

Confirmed CRISPRs (15)

CRISPR id : tmp_1_Crispr_1

CRISPR start position : 82346 ---------- CRISPR end position : 82962 ---------- CRISPR length : 616
DR consensus : GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC
DR length : 36 Number of spacers : 8

82346	GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	AAGCAAATCAATATAACTCCCTTTCTCCTT	82411
82412	GTTGGATCTTCCCTCTATTCGAAGGGTACNNNNNNN	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	82532
82533	NNNNNNNNTACCCTCTATTCGAAGGGTACACACAAC	CGGATTATGACAAGGCTATAAGTAAGACG	82597
82598	GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	AACTGTTTGTAGTTCTCATTCCTCGCCTCC	82663
82664	GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	TAAAGTACTTGAGTTACGAAATCTCCAGCC	82729
82730	GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	GTCGATCGATAAGATAGCACGATACTATAA	82795
82796	GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	GTTGTCTGAAGTCTATCATTTTAAGTAGGT	82861
82862	GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC	ACCCTCGGCGTTGTGTTTTTTGATTAGGT	82926
82927	GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC		82962

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_6

CRISPR start position : 1914157 ---------- CRISPR end position : 1914513 ---------- CRISPR length : 356
DR consensus : ACCCTTCTAACTAAGGGTATTCCCAAC
DR length : 27 Number of spacers : 5

1914157	ACCCTTCTAACTAAGGGTATTCCCAAC	AATCCACCCAGTACATGGTAAGGTTAGGTTGTTGTCTCC	1914222
1914223	ACCCTTCTAACTAAGGGTATTCCCAAC	GGAGTCCGCGGGTGAAATCACCTCAAAAAGTTGTCTCC	1914287
1914288	ACCCTTCTAACTAAGGGTATTCCCAAC	GATATTATAGATTTTGTATCTTCTGATTATGTTGTCTCC	1914353
1914354	ACCCTTCTAACTAAGGGTATTCCCAAC	GCGTGGAGGCTTGGGGCAGTGCTACCGTGGGTTGTCTCC	1914419
1914420	ACCCTTCTAACTAAGGGTATTCCCAAC	TTGTAGAACGAGCTTCAAAACTAATCAATAGTTGTCTCC	1914485
1914486	ACCCTTCTAACTAAGGGTATTCCCAAC		1914513

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_7

CRISPR start position : 1914669 ---------- CRISPR end position : 1914961 ---------- CRISPR length : 292
DR consensus : ACCCTTCTAACTAAGGGTATTCCCAAC
DR length : 27 Number of spacers : 4

1914669	ACCCTTCTAACTAAGGGTATTCCCAAC	AATGCCAGGTCACTGGCAGGATGAGGAAAGGTTGTCTCC	1914734
1914735	ACCCTTCTAACTAAGGGTATTCCCAAC	GTATGCGCCGGGATGATTACTTAGTTAATGGGTTGTCTCC	1914801
1914802	ACCCTTCTAACTAAGGGTATTCCCAAC	ATCAGCTTTATCTCTCTTCATCTGAGTCTCGTTGTCTCC	1914867
1914868	ACCCTTCTAACTAAGGGTATTCCCAAC	AAAAACCAATTTAAGACTAAGGCTGGTTGTGTTGTCTCC	1914933
1914934	ACCCTTCTAACTAAGGGTATNNNNNNN		1914961

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_9

CRISPR start position : 2171355 ---------- CRISPR end position : 2171584 ---------- CRISPR length : 229
DR consensus : ATTTCAATTGCACCATACAGGAATTAAAACG
DR length : 31 Number of spacers : 3

2171355	ATTTCAATTGCACCATACAGGAATTAAAACG	TGAAAACGTCCAAACGCTTGCTCGATCGTTTTCGA	2171420
2171421	ATTTCAATTGCACCATACAGGAATTAAAACG	GGAGTTGCTGCTGGGCTCATGCAAAACAAAAGCCG	2171486
2171487	ATTTCAATTGCACCATACAGGAATTAAAACG	AAATTTAGCCATCTGTCTTGAGAAATTGTGCTGGA	2171552
2171553	ATTTCAATTGCACCATACAGGAATTAANNNN		2171584

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_10

CRISPR start position : 2171678 ---------- CRISPR end position : 2171905 ---------- CRISPR length : 227
DR consensus : ATTTCAATTGCACCATACAGGAATTAAAACG
DR length : 31 Number of spacers : 3

2171678	NNTTCAATTGCACCATACAGGAATTAAAACA	ACAGGGTATCGAGTTCGAAGTCTTCGAAATACTATA	2171744
2171745	ATTTCAATTGCACCATACAGGAATTAAAACG	AGTCTTTCTCTCCGGATATCCATATGATATCGTC	2171809
2171810	ATTTCAATTGCACCATACAGGAATTAAAACG	TCAGGCGAAACAAGATATTGTTTCGGATAATGC	2171873
2171874	ATTTCAATTGCACCATACAGGAATTAAANNN		2171905

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_11

CRISPR start position : 2171999 ---------- CRISPR end position : 2172295 ---------- CRISPR length : 296
DR consensus : ATTTCAATTGCACCATACAGGAATTAAAACG
DR length : 31 Number of spacers : 4

2171999	NNNTCAATTGCACCATACAGGAATTAAAACC	GTCGATTGTTGCGACGCGCAAATGTCGTTGATAA	2172063
2172064	ATTTCAATTGCACCATACAGGAATTAAAACG	GTAAAACATGACGGAAAAATCGTCGCAATTATCTTT	2172130
2172131	ATTTCAATTGCACCATACAGGAATTAAAACG	ACACCGGGTTTATTTTAGGTGTCACGGCATCCTTG	2172196
2172197	ATTTCAATTGCACCATACAGGAATTAAAACG	TTGCGCTTATTGTCGCAGCAGGCATACTGTTATTCA	2172263
2172264	ATTTCAATTGCACCATACAGGAATTAANNNN		2172295

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_12

CRISPR start position : 2172388 ---------- CRISPR end position : 2172616 ---------- CRISPR length : 228
DR consensus : ATTTCAATTGCACCATACAGGAATTAAAACG
DR length : 31 Number of spacers : 3

2172388	NNNTCAATTGCACCATACAGGAATTAAAACA	TGTCATACAGATGATTACAACGCTTACGGGCGTAAT	2172454
2172455	ATTTCAATTGCACCATACAGGAATTAAAACG	ACCCGGATTCATCTTTTTCTGCTGTTGTTTTTGAC	2172520
2172521	ATTTCAATTGCACCATACAGGAATTAAAACG	TATCGGATGTTAAATATCAGCTGTTTTGCGCTG	2172584
2172585	ATTTCAATTGCACCATACAGGAATTAANNNN		2172616

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_13

CRISPR start position : 2172710 ---------- CRISPR end position : 2172939 ---------- CRISPR length : 229
DR consensus : ATTTCAATTGCACCATACAGGAATTAAAACG
DR length : 31 Number of spacers : 3

2172710	NNTTCAATTGCACCATACAGGAATTAAAACA	CTGTCAACTTCGTTTGGCGTCGGCTGAGTAAGA	2172773
2172774	ATTTCAATTGCACCATACAGGAATTAAAACG	GTGCATATCTGGGAAGATACAGGGCGGGTAACGGCAG	2172841
2172842	ATTTCAATTGCACCATACAGGAATTAAAACG	GCATGTGCTAATGTTTTGTGGACGAAATACGAAAT	2172907
2172908	ATTTCAATTGCACCATACAGGAATTAANNNN		2172939

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_14

CRISPR start position : 2173032 ---------- CRISPR end position : 2173848 ---------- CRISPR length : 816
DR consensus : ATTTCAATTGCACCATACAGGAATTAAAACG
DR length : 31 Number of spacers : 12

2173032	NNNTCAATTGCACCATACAGGAATTAAAACA	CAGGCAGGAGTTTTCTTTGTGAACTTATATTTAAT	2173097
2173098	ATTTCAATTGCACCATACAGGAATTAAAACG	GCGCAATGGTTGTGCTATTGTAATCATACTGAAAG	2173163
2173164	ATTTCAATTGCACCATACAGGAATTAAAACG	TGGATATTATTCATAAAACAATAAAGAAATGATTT	2173229
2173230	ATTTCAATTGCACCATACAGGAATTAAAACG	GCTGTCGAAATGGAGTTGCGTCGCTTGGGCTAT	2173293
2173294	ATTTCAATTGCACCATACAGGAATTAAAACG	TGACTTCACGAACTTGACGGCATCGACCTTGACCC	2173359
2173360	ATTTCAATTGCACCATACAGGAATTAAAACG	GCGACGTTGCGCGTGCTGAGCGACACAGACAGGCG	2173425
2173426	ATTTCAATTGCACCATACAGGAATTAAAACG	TGCTCAGAGATATTCGGCTATTCGCGAATCTCGA	2173490
2173491	ATTTCAATTGCACCATACAGGAATTAAAACG	AAAGGCCGCTATAAGGAGTGATGGATATACCCCGA	2173556
2173557	ATTTCAATTGCACCATACAGGAATTAAAACG	CGCACTTCGTCGATGCTGCTCGTATCGATTTTCAA	2173622
2173623	ATTTCAATTGCACCATACAGGAATTAAAACG	AATGAATGGCATAATTAGAGCGTTCTTGGTCGC	2173686
2173687	ATTTCAATTGCACCATACAGGAATTAAAACG	AATAAACTTAATACTGTTATACTCTCGTTGTTCTG	2173752
2173753	ATTTCAATTGCACCATACAGGAATTAAAACG	CGCTGACGGTGCGGTGGATGAACTCCTTCTTGA	2173816
2173817	ATTTCAATTGCACCATACAGGAATTAAANNN		2173848

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_15

CRISPR start position : 2173943 ---------- CRISPR end position : 2174172 ---------- CRISPR length : 229
DR consensus : ATTTCAATTGCACCATACAGGAATTAAAACG
DR length : 31 Number of spacers : 3

2173943	NNTTCAATTGCACCATACAGGAATTAAAACT	CACGATAAATCTTATTATCTTTTACATCGTGCGTAT	2174009
2174010	ATTTCAATTGCACCATACAGGAATTAAAACG	GAAAGATATTGAGGGCTAAAACTTTTTATTTAGA	2174074
2174075	ATTTCAATTGCACCATACAGGAATTAAAACG	TGAGCGAGTATAAATTTAATACTATTATACTCTCG	2174140
2174141	ATTTCAATTGCACCATACAGGAATTAAANNN		2174172

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_16

CRISPR start position : 2174266 ---------- CRISPR end position : 2174557 ---------- CRISPR length : 291
DR consensus : ATTTCAATTGCACCATACAGGAATTAAAACG
DR length : 31 Number of spacers : 4

2174266	NNNTCAATTGCACCATACAGGAATTAAAACC	AAGTCATACGCTATCGTATAGGCTTGGCACTCAGA	2174331
2174332	ATTTCAATTGCACCATACAGGAATTAAAACG	AAAGCATCAAGTAGTCTGTACATATTCGCATCT	2174395
2174396	ATTTCAATTGCACCATACAGGAATTAAAACG	TCTTTTCGATAGTAGTTTGTTATTTGATAATCA	2174459
2174460	ATTTCAATTGCACCATACAGGAATTAAAACG	TACGGGTACATTAAAGACCTTGAGGAGGGAAAAAG	2174525
2174526	ATTTCAATTGCACCATACAGGAATTANNNNN		2174557

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_17

CRISPR start position : 2174648 ---------- CRISPR end position : 2175007 ---------- CRISPR length : 359
DR consensus : ATTTCAATTGCACCATACAGGAATTAAAACG
DR length : 31 Number of spacers : 5

2174648	NNNNCAATTGCACCATACAGGAATTAAAACT	AGTCGTTCGGCGTCTTCTTCTGTAAAGAATCTGAA	2174713
2174714	ATTTCAATTGCACCATACAGGAATTAAAACG	AGTATCTGCATTAGATATTCGTAAATAGCACAA	2174777
2174778	ATTTCAATTGCACCATACAGGAATTAAAACG	GATAATTCTAAGAACTGCACAATAGTATCTGCATT	2174843
2174844	ATTTCAATTGCACCATACAGGAATTAAAACG	ATTCATTAGTTCACTAAGTGATTTCTTCACGTCGT	2174909
2174910	ATTTCAATTGCACCATACAGGAATTAAAACG	ATTGCCTTGTGCTGCTGCGATCTCGGATGCATACT	2174975
2174976	ATTTCAATTGCACCATACAGGAATTAAANNN		2175007

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_18

CRISPR start position : 2175101 ---------- CRISPR end position : 2175329 ---------- CRISPR length : 228
DR consensus : ATTTCAATTGCACCATACAGGAATTAAAACG
DR length : 31 Number of spacers : 3

2175101	NNNTCAATTGCACCATACAGGAATTAAAACA	ATTTTTCCATAAGATACAAAATTTTAACAGTCTT	2175165
2175166	ATTTCAATTGCACCATACAGGAATTAAAACG	AATAAACTTAATACTGTTATACTCTCGTTGTTCTG	2175231
2175232	ATTTCAATTGCACCATACAGGAATTAAAACG	TTCTTTCTGTATTTCCCGCATGGCATCCTCATCTA	2175297
2175298	ATTTCAATTGCACCATACAGGAATTAAANNN		2175329

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_19

CRISPR start position : 2175423 ---------- CRISPR end position : 2175649 ---------- CRISPR length : 226
DR consensus : ATTTCAATTGCACCATACAGGAATTAAAACG
DR length : 31 Number of spacers : 3

2175423	NNNTCAATTGCACCATACAGGAATTAAAACA	AGAACGTCGCGAAGGGCATTGTCGCGGGCGGCG	2175486
2175487	ATTTCAATTGCACCATACAGGAATTAAAACG	AGCAAGACGTCGGCAGAAGACATAAAGGAGTCGG	2175551
2175552	ATTTCAATTGCACCATACAGGAATTAAAACG	TCATTTGAGTCGGATTAGAGTAGTTACCAACGATA	2175617
2175618	ATTTCAATTGCACCATACAGGAATTANNNNN		2175649

Display spacers	Crispr Properties

CRISPR id : tmp_1_Crispr_20

CRISPR start position : 2175741 ---------- CRISPR end position : 2176034 ---------- CRISPR length : 293
DR consensus : ATTTCAATTGCACCATACAGGAATTAAAACG
DR length : 31 Number of spacers : 4

2175741	NNNTCAATTGCACCATACAGGAATTAAAACA	CGTATCCGACAAGGTGGCAAACCTGTACGAGGATA	2175806
2175807	ATTTCAATTGCACCATACAGGAATTAAAACG	AATAGATAATATAGAGAGATATCCATTTAAGTT	2175870
2175871	ATTTCAATTGCACCATACAGGAATTAAAACG	TTGTACTGCTTCATGAGCTCGGGATCCTCTCGCA	2175935
2175936	ATTTCAATTGCACCATACAGGAATTAAAACG	AAACATTGCCACGCCGATAACGAACGTTTCAGCGGA	2176002
2176003	ATTTCAATTGCACCATACAGGAATTAANNNN		2176034

Display spacers	Crispr Properties

CRISPR id : tmp_1_PossibleCrispr_2

CRISPR start position : 186618 ---------- CRISPR end position : 186715 ---------- CRISPR length : 97
DR consensus : GGTAGATATGTTCTTTAGTAGATCCGATCC
DR length : 30 Number of spacers : 1

186618	GGTAGATATGTTCTTTAGTAGATCCGATCC	ATTCAATGGAGAGACCAACAACGGGCAGATGATGCACC	186685
186686	GGTAGATATGTTCTTTAGTAGATCCGATCC		186715

Display spacers	Crispr Properties

CRISPR id : tmp_1_PossibleCrispr_3

CRISPR start position : 437008 ---------- CRISPR end position : 437104 ---------- CRISPR length : 96
DR consensus : GGCGTATATTCAATATGTTCGCTTCAAGGG
DR length : 30 Number of spacers : 1

437008	GGCGTATATTCAATATGTTCGCTTCAAGGG	GCCGGGCTCGTGTCGAGTAATTCTCCTCCCCCGACGG	437074
437075	GGCGTATATTCAATATGTTCGCTTCAAGGG		437104

Display spacers	Crispr Properties

CRISPR id : tmp_1_PossibleCrispr_4

CRISPR start position : 1513908 ---------- CRISPR end position : 1514055 ---------- CRISPR length : 147
DR consensus : GAACCAAGGACCCTCTGATTAACAGTCAGATGCTCTAACCAACTGAGCTAAG
DR length : 52 Number of spacers : 1

1513908	GAACCAAGGACCCTCTGATTAACAGTCAGATGCTCTAACCAACTGAGCTAAG	GAAGAATAGAAAAACGGCTTGTGAGAGCGCTTTCTCTTGGGCTC	1514003
1514004	GAACCAAGGACCCTCTGATTAACAGTCAGATGCTCTAACCGACTGAGCTAAG		1514055

Display spacers	Crispr Properties

CRISPR id : tmp_1_PossibleCrispr_5

CRISPR start position : 1579092 ---------- CRISPR end position : 1579188 ---------- CRISPR length : 96
DR consensus : TTGCTTACAATTCTATTCTTCTCATCGTGGTG
DR length : 32 Number of spacers : 1

1579092	TTGCTTACAATTCTATTCTTCTCATCGTGGTG	AAAAAGCAGATCAGACACCGAGATCGTGGAGGA	1579156
1579157	TTGCTTACAATTCTATTCTTCTCATCGTGGTG		1579188

Display spacers	Crispr Properties

CRISPR id : tmp_1_PossibleCrispr_8

CRISPR start position : 1915054 ---------- CRISPR end position : 1915212 ---------- CRISPR length : 158
DR consensus : ACCCTTCTAACTAAGGGTATTCCCAAC
DR length : 27 Number of spacers : 2

1915054	ACCCTTCTAACTAAGGGTATTCCCAAC	GTAATAAGAGCTTCAGACCATTGGTGTTGGGTTGTCTCC	1915119
1915120	ACCCTTCTAACTAAGGGTATTCCCAAC	TATTTATCGAATTATAATAAATCATTATAAGTTGTCTCC	1915185
1915186	ACCCTTCTAACTAAGGGTATTCCCAAC		1915212

Display spacers	Crispr Properties

CRISPR id : tmp_1_PossibleCrispr_21

CRISPR start position : 2176128 ---------- CRISPR end position : 2176222 ---------- CRISPR length : 94
DR consensus : ATTTCAATTGCACCATACAGGAATTAAAACG
DR length : 31 Number of spacers : 1

2176128	NNTTCAATTGCACCATACAGGAATTAAAACT	TCAGTAGTGCGCTGACAACAAGCGCGCGCATAA	2176191
2176192	ATTTCAATTGCACCATACAGGAATTAAAATG		2176222

Display spacers	Crispr Properties