HOMD User Documentation     
4-94] BLAST Color schema description
  • Color schema 1:
    • masked regions in lower case
    • everything else in upper case
  • Color schema 2:
    • masked regions in lower case, gray letters
    • Unaligned regions in italic
    • everything else in upper case
  • Color schema 3:
    • No middle line.
    • Masked regions in lower case, gray letters unless identity
    • Everything else in upper case
    • Unaligned regions in italic
    • Identity shown in red color
    • Similarity shown in blue color
    • Mismatches shown in black color
  • Color schema 4:
    • No middle line.
    • Masked regions in lower case, gray letters
    • Everything else in upper case
    • Unaligned regions in italic
    • Identity shown in blue color
    • Similarity shown in brown color
    • Mismatches shown in red color
  • Color schema 5:
    • No middle line.
    • Masked regions in lower case, gray letters
    • Everything else in upper case
    • Unaligned regions in italic
    • Identity shown in red color
    • Similarity shown in blue color
    • Mismatches shown in black color
  • Color schema 6:
    • No middle line.
    • Masked regions in lower case, gray letters unless identity
    • Everything else in upper case
    • Unaligned regions in italic
    • Identity shown in red bold color
    • Similarity shown in blue color
    • Mismatches shown in gray color
Article last modified on 2014-04-08 11:01:26 by lyang; viewed 1192 times; Category: User Documentation; Topic: Tools & Downloa

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