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Post subject: Genome Annotation Update - Simonsiella muelleri ATCC 29453  PostPosted: Feb 22, 2016 - 06:53 AM



Joined: Dec 31, 1969
Posts: 16777215

Automatic annotation for the genome - Simonsiella muelleri ATCC 29453 has been updated. Please visit HOMD web site to view the genome:
Link to HOMD Genome Viewer
Link to HOMD Dynamic Annotation


Summary of the annotation:

Full Name: Simonsiella muelleri ATCC 29453
SEQ_ID: SEQF1652

Total contigs received: 82
Total bps received: 2343541
Average GC%: 41.49 (of total bps received)

Longest contig: 158375 bps
Shortest contig: 1105 bps
Contigs 300 - 300 bps: 0
Contigs 301 - 500 bps: 0
Contigs 501 - 1000 bps: 0
Contigs 1001 - 1500 bps: 5
Contigs > 1500 bps: 77

Total ORFs*: 2400

Total BLASTP hits against NCBI nr: 2224
NCBI nr protein database dated: 2014-12-02

Total BLASTP hits against SwissProt: 1491
SwissProt protein database dated: 2014-12-01

ORFs with KEGG hits: 522
ORFs with GO hits: 187

* Minimal size of ORFs annotated by GeneMarkS = 50 a.a. (150 n.a.)

Please address your questions to homd_curator@homd.org

~The HOMD Team~
 
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