Human Oral Microbiome Taxon Description
Lachnoanaerobaculum umeaense
Human Oral Taxon ID (HOT):107Synonym:
Oral Strain F0167
Oral Strain C27KA
Lachnospiraceae [G-1] sp. oral taxon 107
Lachnospiraceae bacterium oral taxon 107
Named - Cultured
Type Strain:
More info at StrainInfo
Family:Lachnospiraceae [XIV]
NCBI Taxonomy ID:
16S rRNA Sequence:
FJ796700  [Entrez Link]
AF287777  [Entrez Link]
FJ577253  [Entrez Link]
PubMed Search:1  [PubMed Link]
16S rRNA Alignment: View Alignment         Download Alignment         NoteNucleotide Search:2  [Entrez Nucleotide Link]
Phylogeny: View 16S rRNA tree         View all Tree filesProtein Search:0  [Entrez Protein Link]
Prevalence by Molecular Cloning:
Clones seen = 54 / 34879 = 0.155%
Rank Abundance = Tied for 118
Genome Sequence
1 View Genome
Hierarchy Structure:    Hide or show the hierarchy structure
General Information:
Lachnospiraceae bacterium Oral taxon 107 strain F0167 has been isolated from a human subject by the Moore's Laboratory in March 1988. The subject was a 14 year old American white male. The bacteria was isolated from the subgingival oral biofilm. The bacteria was grown in anaerobic conditions. The partial 16S ribosomal RNA gene was deposited to GenBank under the reference FJ577253. The strain is available at under the reference HM-7. The genome of this strain is available as ADDS00000000.  Recently named Lachnoanaerobaculum umeaense in "Lachnospiraceae; characterization of Lachnoanaerobaculum umeaense gen. nov., sp. nov., isolated from human small intestine, Lachnoanaerobaculum orale gen. nov., sp. nov., isolated from saliva and reclassification of Eubacterium saburreum (Prevot) Holdeman and Moore 1970 as Lachnoanaerobaculum saburreum comb. nov". PMID: 22228654.   The name change is not yet refledted for the genome at NCBI (11-02-2012).
Curator:  Jacques
Creation Info:   Latest Modification:  fdewhirst,  2012-11-02 08:31:22

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