Home Login Register Reset Password Taxon Description Taxon Table Taxonomic Hierarchy Taxonomic Level Download Taxonomy Data 16S rRNA RefSeq Identify 16S rRNA using BLASTN View 16S rRNA RefSeq Phylogenetic Tree Download 16S rRNA RefSeq & Taxonomy HOMD 16S rRNA RefSeq Version History Genomes Taxa with Annotated Genomes All Oral Genomes All Genomes HOMD JBrowse Genome Viewer » Select an HOMD genome to view in JBrowse Upload your own reference sequence HOMD only! Genomic Trees » PhyloPhlAn Conserved Protein Tree Ribosomal Protein Tree 16S rRNA Gene Tree Download Genomic Data HOMD Reference Genome Version History Proteomes View genomic tree based on conserved proteins Download All Protein Sequences Annotated from Genomes HOMD Tools HOMD JBrowse Genome Viewer » Select an HOMD genome to view in JBrowse Upload your own reference sequence HOMD only! Genome Annotations BLAST Against HOMD Genomes » BLAST against a genome BLAST against all genomes Download Download HOMD Data HOMD FTP Site HOMD Posters Oralgen Archive » Oralgen Archive Oralgen Genome Info HOMD Information How to Cite HOMD How to Use This Page » User's Guide Hands on Guide to HOMD Quick Tour to HOMD 2015 Project Description Strains and DNA Availability People Contact Us Mailing List Usage Statistics Site Map Page: HP1 16S rRNA Refseq V15.2 Genomic RefSeq V9.03

HOMD Genomes  Navigate genomes by Phylum:  Select a phylumActinobacteriaBacteroidetesChlamydiaeChloroflexiEuryarchaeotaFirmicutesFusobacteriaGN02ProteobacteriaSpirochaetesSR1SynergistetesTenericutesTM7  Navigate genomes by alphabet:  A|B|C|D|E|F|G|H|I|J|K|L|M|N|O|P|Q|R|S|T|U|V|W|X|Y|Z|All Entries: 1558 genomes   genomes: Options [+] In: All fieldsTaxon IDGenusSpeciesCulture collectionIsolation originSequence statusSequence centerSEQ ID Matching ALL wordsANY wordsExact phrase Partial fieldWhole field   Sequencing Status: All Complete High Coverage Survey  Annotation: All HOMD with StaticHOMD onlyStatic onlyNon-oral/nasal  No. of genomes starting with R: 20  Taxon ID* Genus * Species * Strain/Culture Collection * SEQ ID * No. of contigs & singlets * Combined length (bp) * Genome Info and Tools Available Annotations HMT-854 Ralstonia pickettii DTP0602 SEQF2603 3 8,125,850 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-854 Ralstonia pickettii 12D SEQF1977 5 5,685,358 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-854 Ralstonia pickettii OR214 SEQF2514 46 5,480,587 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-854 Ralstonia pickettii 12J SEQF2172 3 5,325,729 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-857 Rhodobacter capsulatus DE442 SEQF2620 40 3,760,501 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-857 Rhodobacter capsulatus Y262 SEQF2622 51 3,844,355 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-857 Rhodobacter capsulatus B6 SEQF2619 113 3,805,767 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-857 Rhodobacter capsulatus YW2 SEQF2624 62 3,771,447 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-857 Rhodobacter capsulatus R121 SEQF2621 36 3,760,694 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-857 Rhodobacter capsulatus SB 1003 SEQF1980 2 3,871,920 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-857 Rhodobacter capsulatus YW1 SEQF2623 51 3,647,740 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-244 Roseomonas gilardii u14_5 SEQF2908 5 5,412,463 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-245 Roseomonas mucosa au37 SEQF2894 249 4,741,248 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-188 Rothia aeria F0184 SEQF1688 32 2,603,188 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-188 Rothia aeria F0474 SEQF1901 50 2,584,293 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-587 Rothia dentocariosa ATCC 17931 SEQF1925 1 2,506,025 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-587 Rothia dentocariosa M567 SEQF1994 6 2,532,787 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-681 Rothia mucilaginosa M508 SEQF2197 8 2,313,271 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-681 Rothia mucilaginosa ATCC 25296 SEQF1039 25 2,255,158 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD HMT-681 Rothia mucilaginosa DY-18 SEQF1724 1 2,264,603 Taxon Desc Genome Info Genome Viewer BLAST PROKKA NCBI HOMD *  Click to toggle the sorting order.          Data last updated on :2019-10-09 15:25:32

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