Genome Explorer: Limosilactobacillus fermentum SRCM 103290 (SEQF9216.1)
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PROKKA Annotation for SEQF9216.1
| Genome selected: Limosilactobacillus fermentum SRCM 103290 | |||
| Contigs: | 1 | Bases: | 2120877 bps |
| CDS: | 2089 | rRNA: | 15 |
| tmRNA: | 1 | tRNA: | 59 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2001 | SEQF9216.1_CP035055.1 | SEQF9216.1_02102 | open | 633 [NA] | 210 [AA] | 2053317-2053949 | hypothetical protein | |
| 2002 | SEQF9216.1_CP035055.1 | SEQF9216.1_02103 | open | 1314 [NA] | 437 [AA] | 2053978-2055291 | murC | UDP-N-acetylmuramate--L-alanine ligase |
| 2003 | SEQF9216.1_CP035055.1 | SEQF9216.1_02104 | open | 711 [NA] | 236 [AA] | 2055369-2056079 | ybhL | Inner membrane protein YbhL |
| 2004 | SEQF9216.1_CP035055.1 | SEQF9216.1_02105 | open | 750 [NA] | 249 [AA] | 2056117-2056866 | hypothetical protein | |
| 2005 | SEQF9216.1_CP035055.1 | SEQF9216.1_02106 | open | 2661 [NA] | 886 [AA] | 2057008-2059668 | polA | DNA polymerase I |
| 2006 | SEQF9216.1_CP035055.1 | SEQF9216.1_02107 | open | 840 [NA] | 279 [AA] | 2059753-2060592 | mutM | Formamidopyrimidine-DNA glycosylase |
| 2007 | SEQF9216.1_CP035055.1 | SEQF9216.1_02108 | open | 621 [NA] | 206 [AA] | 2060585-2061205 | coaE | Dephospho-CoA kinase |
| 2008 | SEQF9216.1_CP035055.1 | SEQF9216.1_02109 | open | 459 [NA] | 152 [AA] | 2061250-2061708 | nrdR | Transcriptional repressor NrdR |
| 2009 | SEQF9216.1_CP035055.1 | SEQF9216.1_02110 | open | 1362 [NA] | 453 [AA] | 2061708-2063069 | dnaB | Replication initiation and membrane attachment protein |
| 2010 | SEQF9216.1_CP035055.1 | SEQF9216.1_02111 | open | 945 [NA] | 314 [AA] | 2063102-2064046 | dnaI | Primosomal protein DnaI |
| 2011 | SEQF9216.1_CP035055.1 | SEQF9216.1_02113 | open | 510 [NA] | 169 [AA] | 2064262-2064771 | infC | Translation initiation factor IF-3 |
| 2012 | SEQF9216.1_CP035055.1 | SEQF9216.1_02114 | open | 198 [NA] | 65 [AA] | 2064794-2064991 | rpmI | 50S ribosomal protein L35 |
| 2013 | SEQF9216.1_CP035055.1 | SEQF9216.1_02115 | open | 354 [NA] | 117 [AA] | 2065041-2065394 | rplT | 50S ribosomal protein L20 |
| 2014 | SEQF9216.1_CP035055.1 | SEQF9216.1_02116 | open | 321 [NA] | 106 [AA] | 2065949-2066269 | hypothetical protein | |
| 2015 | SEQF9216.1_CP035055.1 | SEQF9216.1_02117 | open | 540 [NA] | 179 [AA] | 2066328-2066867 | hypothetical protein | |
| 2016 | SEQF9216.1_CP035055.1 | SEQF9216.1_02118 | open | 1125 [NA] | 374 [AA] | 2066851-2067975 | yqeH | putative protein YqeH |
| 2017 | SEQF9216.1_CP035055.1 | SEQF9216.1_02119 | open | 312 [NA] | 103 [AA] | 2067994-2068305 | RNA-binding protein | |
| 2018 | SEQF9216.1_CP035055.1 | SEQF9216.1_02120 | open | 633 [NA] | 210 [AA] | 2068321-2068953 | nadD | Nicotinate-nucleotide adenylyltransferase |
| 2019 | SEQF9216.1_CP035055.1 | SEQF9216.1_02121 | open | 612 [NA] | 203 [AA] | 2068946-2069557 | hypothetical protein | |
| 2020 | SEQF9216.1_CP035055.1 | SEQF9216.1_02122 | open | 360 [NA] | 119 [AA] | 2069558-2069917 | rsfS | Ribosomal silencing factor RsfS |
| 2021 | SEQF9216.1_CP035055.1 | SEQF9216.1_02123 | open | 747 [NA] | 248 [AA] | 2069914-2070660 | cmoM | tRNA 5-carboxymethoxyuridine methyltransferase |
| 2022 | SEQF9216.1_CP035055.1 | SEQF9216.1_02124 | open | 1128 [NA] | 375 [AA] | 2070661-2071788 | tmcAL | tRNA(Met) cytidine acetate ligase |
| 2023 | SEQF9216.1_CP035055.1 | SEQF9216.1_02125 | open | 552 [NA] | 183 [AA] | 2071874-2072425 | hypothetical protein | |
| 2024 | SEQF9216.1_CP035055.1 | SEQF9216.1_02126 | open | 177 [NA] | 58 [AA] | 2072477-2072653 | rpmF | 50S ribosomal protein L32 |
| 2025 | SEQF9216.1_CP035055.1 | SEQF9216.1_02127 | open | 687 [NA] | 228 [AA] | 2072810-2073496 | arlR | Response regulator ArlR |
| 2026 | SEQF9216.1_CP035055.1 | SEQF9216.1_02128 | open | 1506 [NA] | 501 [AA] | 2073510-2075015 | sasA_4 | Adaptive-response sensory-kinase SasA |
| 2027 | SEQF9216.1_CP035055.1 | SEQF9216.1_02129 | open | 1317 [NA] | 438 [AA] | 2075180-2076496 | mepA_4 | Multidrug export protein MepA |
| 2028 | SEQF9216.1_CP035055.1 | SEQF9216.1_02130 | open | 411 [NA] | 136 [AA] | 2076653-2077063 | def_2 | Peptide deformylase |
| 2029 | SEQF9216.1_CP035055.1 | SEQF9216.1_02131 | open | 912 [NA] | 303 [AA] | 2077179-2078090 | yidC | Membrane protein insertase YidC |
| 2030 | SEQF9216.1_CP035055.1 | SEQF9216.1_02132 | open | 279 [NA] | 92 [AA] | 2078157-2078435 | acyP | Acylphosphatase |
| 2031 | SEQF9216.1_CP035055.1 | SEQF9216.1_02133 | open | 807 [NA] | 268 [AA] | 2078474-2079280 | trmH | tRNA (guanosine(18)-2-O)-methyltransferase |
| 2032 | SEQF9216.1_CP035055.1 | SEQF9216.1_02134 | open | 516 [NA] | 171 [AA] | 2079385-2079900 | hypothetical protein | |
| 2033 | SEQF9216.1_CP035055.1 | SEQF9216.1_02135 | open | 333 [NA] | 110 [AA] | 2079920-2080252 | yodB | HTH-type transcriptional regulator YodB |
| 2034 | SEQF9216.1_CP035055.1 | SEQF9216.1_02136 | open | 1047 [NA] | 348 [AA] | 2080543-2081589 | pheS | Phenylalanine--tRNA ligase alpha subunit |
| 2035 | SEQF9216.1_CP035055.1 | SEQF9216.1_02137 | open | 2439 [NA] | 812 [AA] | 2081595-2084033 | pheT | Phenylalanine--tRNA ligase beta subunit |
| 2036 | SEQF9216.1_CP035055.1 | SEQF9216.1_02138 | open | 651 [NA] | 216 [AA] | 2084166-2084816 | udk | Uridine kinase |
| 2037 | SEQF9216.1_CP035055.1 | SEQF9216.1_02139 | open | 477 [NA] | 158 [AA] | 2084889-2085365 | greA_2 | Transcription elongation factor GreA |
| 2038 | SEQF9216.1_CP035055.1 | SEQF9216.1_02140 | open | 999 [NA] | 332 [AA] | 2085416-2086414 | IS30 family transposase ISSlu1 | |
| 2039 | SEQF9216.1_CP035055.1 | SEQF9216.1_02141 | open | 135 [NA] | 44 [AA] | 2086473-2086607 | hypothetical protein | |
| 2040 | SEQF9216.1_CP035055.1 | SEQF9216.1_02142 | open | 2628 [NA] | 875 [AA] | 2086539-2089166 | hypothetical protein | |
| 2041 | SEQF9216.1_CP035055.1 | SEQF9216.1_02143 | open | 2085 [NA] | 694 [AA] | 2089369-2091453 | penA | Penicillin-binding protein 2B |
| 2042 | SEQF9216.1_CP035055.1 | SEQF9216.1_02144 | open | 150 [NA] | 49 [AA] | 2091596-2091745 | rpmGA | 50S ribosomal protein L33 1 |
| 2043 | SEQF9216.1_CP035055.1 | SEQF9216.1_02145 | open | 555 [NA] | 184 [AA] | 2091969-2092523 | yqgN | putative protein YqgN |
| 2044 | SEQF9216.1_CP035055.1 | SEQF9216.1_02146 | open | 612 [NA] | 203 [AA] | 2092580-2093191 | gluP | Rhomboid protease GluP |
| 2045 | SEQF9216.1_CP035055.1 | SEQF9216.1_02147 | open | 237 [NA] | 78 [AA] | 2093188-2093424 | hypothetical protein | |
| 2046 | SEQF9216.1_CP035055.1 | SEQF9216.1_02148 | open | 963 [NA] | 320 [AA] | 2093442-2094404 | glcK | Glucokinase |
| 2047 | SEQF9216.1_CP035055.1 | SEQF9216.1_02149 | open | 420 [NA] | 139 [AA] | 2094429-2094848 | glpE | Thiosulfate sulfurtransferase GlpE |
| 2048 | SEQF9216.1_CP035055.1 | SEQF9216.1_02150 | open | 177 [NA] | 58 [AA] | 2095029-2095205 | hypothetical protein | |
| 2049 | SEQF9216.1_CP035055.1 | SEQF9216.1_02151 | open | 924 [NA] | 307 [AA] | 2095304-2096227 | miaA | tRNA dimethylallyltransferase |
| 2050 | SEQF9216.1_CP035055.1 | SEQF9216.1_02152 | open | 1353 [NA] | 450 [AA] | 2096426-2097778 | glnA | Glutamine synthetase |
| 2051 | SEQF9216.1_CP035055.1 | SEQF9216.1_02153 | open | 129 [NA] | 42 [AA] | 2097932-2098060 | hypothetical protein | |
| 2052 | SEQF9216.1_CP035055.1 | SEQF9216.1_02154 | open | 894 [NA] | 297 [AA] | 2098328-2099221 | hypothetical protein | |
| 2053 | SEQF9216.1_CP035055.1 | SEQF9216.1_02155 | open | 969 [NA] | 322 [AA] | 2099214-2100182 | hypothetical protein | |
| 2054 | SEQF9216.1_CP035055.1 | SEQF9216.1_02156 | open | 534 [NA] | 177 [AA] | 2100175-2100708 | hypothetical protein | |
| 2055 | SEQF9216.1_CP035055.1 | SEQF9216.1_02157 | open | 1089 [NA] | 362 [AA] | 2101270-2102358 | xerC_4 | Tyrosine recombinase XerC |
| 2056 | SEQF9216.1_CP035055.1 | SEQF9216.1_02158 | open | 801 [NA] | 266 [AA] | 2102456-2103256 | hypothetical protein | |
| 2057 | SEQF9216.1_CP035055.1 | SEQF9216.1_02159 | open | 768 [NA] | 255 [AA] | 2103642-2104409 | IS3 family transposase IS1163 | |
| 2058 | SEQF9216.1_CP035055.1 | SEQF9216.1_02160 | open | 264 [NA] | 87 [AA] | 2104448-2104711 | IS3 family transposase IS1163 | |
| 2059 | SEQF9216.1_CP035055.1 | SEQF9216.1_02161 | open | 120 [NA] | 39 [AA] | 2104762-2104881 | hypothetical protein | |
| 2060 | SEQF9216.1_CP035055.1 | SEQF9216.1_02162 | open | 531 [NA] | 176 [AA] | 2104897-2105427 | hypothetical protein | |
| 2061 | SEQF9216.1_CP035055.1 | SEQF9216.1_02163 | open | 1329 [NA] | 442 [AA] | 2105602-2106930 | hypothetical protein | |
| 2062 | SEQF9216.1_CP035055.1 | SEQF9216.1_02164 | open | 390 [NA] | 129 [AA] | 2106983-2107372 | hypothetical protein | |
| 2063 | SEQF9216.1_CP035055.1 | SEQF9216.1_02165 | open | 342 [NA] | 113 [AA] | 2107383-2107724 | hypothetical protein | |
| 2064 | SEQF9216.1_CP035055.1 | SEQF9216.1_02166 | open | 198 [NA] | 65 [AA] | 2107903-2108100 | hypothetical protein | |
| 2065 | SEQF9216.1_CP035055.1 | SEQF9216.1_02167 | open | 768 [NA] | 255 [AA] | 2108149-2108916 | hypothetical protein | |
| 2066 | SEQF9216.1_CP035055.1 | SEQF9216.1_02168 | open | 270 [NA] | 89 [AA] | 2109029-2109298 | hypothetical protein | |
| 2067 | SEQF9216.1_CP035055.1 | SEQF9216.1_02169 | open | 327 [NA] | 108 [AA] | 2109358-2109684 | hypothetical protein | |
| 2068 | SEQF9216.1_CP035055.1 | SEQF9216.1_02170 | open | 138 [NA] | 45 [AA] | 2109696-2109833 | hypothetical protein | |
| 2069 | SEQF9216.1_CP035055.1 | SEQF9216.1_02171 | open | 171 [NA] | 56 [AA] | 2109826-2109996 | hypothetical protein | |
| 2070 | SEQF9216.1_CP035055.1 | SEQF9216.1_02172 | open | 210 [NA] | 69 [AA] | 2110044-2110253 | hypothetical protein | |
| 2071 | SEQF9216.1_CP035055.1 | SEQF9216.1_02173 | open | 993 [NA] | 330 [AA] | 2110256-2111248 | hypothetical protein | |
| 2072 | SEQF9216.1_CP035055.1 | SEQF9216.1_02174 | open | 849 [NA] | 282 [AA] | 2111241-2112089 | hypothetical protein | |
| 2073 | SEQF9216.1_CP035055.1 | SEQF9216.1_02175 | open | 435 [NA] | 144 [AA] | 2112090-2112524 | Single-stranded DNA-binding protein | |
| 2074 | SEQF9216.1_CP035055.1 | SEQF9216.1_02176 | open | 750 [NA] | 249 [AA] | 2112539-2113288 | hypothetical protein | |
| 2075 | SEQF9216.1_CP035055.1 | SEQF9216.1_02177 | open | 819 [NA] | 272 [AA] | 2113297-2114115 | hypothetical protein | |
| 2076 | SEQF9216.1_CP035055.1 | SEQF9216.1_02178 | open | 192 [NA] | 63 [AA] | 2114119-2114310 | hypothetical protein | |
| 2077 | SEQF9216.1_CP035055.1 | SEQF9216.1_02179 | open | 189 [NA] | 62 [AA] | 2114276-2114464 | hypothetical protein | |
| 2078 | SEQF9216.1_CP035055.1 | SEQF9216.1_02180 | open | 300 [NA] | 99 [AA] | 2114461-2114760 | hypothetical protein | |
| 2079 | SEQF9216.1_CP035055.1 | SEQF9216.1_02181 | open | 204 [NA] | 67 [AA] | 2114878-2115081 | hypothetical protein | |
| 2080 | SEQF9216.1_CP035055.1 | SEQF9216.1_02182 | open | 315 [NA] | 104 [AA] | 2115074-2115388 | hypothetical protein | |
| 2081 | SEQF9216.1_CP035055.1 | SEQF9216.1_02183 | open | 111 [NA] | 36 [AA] | 2115465-2115575 | hypothetical protein | |
| 2082 | SEQF9216.1_CP035055.1 | SEQF9216.1_02184 | open | 126 [NA] | 41 [AA] | 2115814-2115939 | hypothetical protein | |
| 2083 | SEQF9216.1_CP035055.1 | SEQF9216.1_02185 | open | 450 [NA] | 149 [AA] | 2115932-2116381 | hypothetical protein | |
| 2084 | SEQF9216.1_CP035055.1 | SEQF9216.1_02186 | open | 474 [NA] | 157 [AA] | 2116450-2116923 | hypothetical protein | |
| 2085 | SEQF9216.1_CP035055.1 | SEQF9216.1_02187 | open | 207 [NA] | 68 [AA] | 2117122-2117328 | hypothetical protein | |
| 2086 | SEQF9216.1_CP035055.1 | SEQF9216.1_02188 | open | 267 [NA] | 88 [AA] | 2117729-2117995 | hypothetical protein | |
| 2087 | SEQF9216.1_CP035055.1 | SEQF9216.1_02189 | open | 306 [NA] | 101 [AA] | 2118680-2118985 | hypothetical protein | |
| 2088 | SEQF9216.1_CP035055.1 | SEQF9216.1_02190 | open | 579 [NA] | 192 [AA] | 2119736-2120314 | hypothetical protein | |
| 2089 | SEQF9216.1_CP035055.1 | SEQF9216.1_02191 | open | 204 [NA] | 67 [AA] | 2120362-2120565 | hypothetical protein |