Genome Explorer: Gardnerella vaginalis UMB0742 (SEQF8013.1)
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PROKKA Annotation for SEQF8013.1
| Genome selected: Gardnerella vaginalis UMB0742 | |||
| Contigs: | 1 | Bases: | 1472679 bps |
| CDS: | 1105 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 45 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 1001 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01056 | open | 2115 [NA] | 704 [AA] | 1332692-1334806 | btuD_12 | Vitamin B12 import ATP-binding protein BtuD |
| 1002 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01057 | open | 132 [NA] | 43 [AA] | 1334803-1334934 | hypothetical protein | |
| 1003 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01058 | open | 975 [NA] | 324 [AA] | 1335003-1335977 | hypothetical protein | |
| 1004 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01059 | open | 993 [NA] | 330 [AA] | 1335974-1336966 | bcrA | Bacitracin transport ATP-binding protein BcrA |
| 1005 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01060 | open | 807 [NA] | 268 [AA] | 1337113-1337919 | trmH | tRNA (guanosine(18)-2-O)-methyltransferase |
| 1006 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01061 | open | 930 [NA] | 309 [AA] | 1337977-1338906 | hypothetical protein | |
| 1007 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01062 | open | 1341 [NA] | 446 [AA] | 1338965-1340305 | hypothetical protein | |
| 1008 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01063 | open | 2595 [NA] | 864 [AA] | 1340450-1343044 | clpB | Chaperone protein ClpB |
| 1009 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01064 | open | 816 [NA] | 271 [AA] | 1343360-1344175 | hypothetical protein | |
| 1010 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01065 | open | 792 [NA] | 263 [AA] | 1344214-1345005 | Pyridoxal phosphate homeostasis protein | |
| 1011 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01066 | open | 1050 [NA] | 349 [AA] | 1345048-1346097 | gltX1 | Glutamate--tRNA ligase 1 |
| 1012 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01067 | open | 786 [NA] | 261 [AA] | 1346248-1347033 | gla | Glycerol facilitator-aquaporin gla |
| 1013 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01068 | open | 2238 [NA] | 745 [AA] | 1347643-1349880 | ppk | Polyphosphate kinase |
| 1014 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01069 | open | 1161 [NA] | 386 [AA] | 1350170-1351330 | hypothetical protein | |
| 1015 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01070 | open | 654 [NA] | 217 [AA] | 1351377-1352030 | hypothetical protein | |
| 1016 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01071 | open | 639 [NA] | 212 [AA] | 1352322-1352960 | upp | Uracil phosphoribosyltransferase |
| 1017 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01072 | open | 798 [NA] | 265 [AA] | 1353087-1353884 | gatD | Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD |
| 1018 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01073 | open | 1419 [NA] | 472 [AA] | 1353890-1355308 | murT | Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit MurT |
| 1019 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01074 | open | 1461 [NA] | 486 [AA] | 1355324-1356784 | hypothetical protein | |
| 1020 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01075 | open | 1362 [NA] | 453 [AA] | 1356840-1358201 | yeeO | putative FMNFAD exporter YeeO |
| 1021 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01076 | open | 1782 [NA] | 593 [AA] | 1358621-1360402 | hypothetical protein | |
| 1022 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01077 | open | 1212 [NA] | 403 [AA] | 1360565-1361776 | ftsY | Signal recognition particle receptor FtsY |
| 1023 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01078 | open | 261 [NA] | 86 [AA] | 1361934-1362194 | Putative glutaredoxin.1 | |
| 1024 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01080 | open | 1416 [NA] | 471 [AA] | 1362492-1363907 | hypothetical protein | |
| 1025 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01081 | open | 1128 [NA] | 375 [AA] | 1364158-1365285 | msiK | Diacetylchitobiose uptake system ATP-binding protein MsiK |
| 1026 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01083 | open | 960 [NA] | 319 [AA] | 1365526-1366485 | hypothetical protein | |
| 1027 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01084 | open | 963 [NA] | 320 [AA] | 1366581-1367543 | hypothetical protein | |
| 1028 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01085 | open | 1824 [NA] | 607 [AA] | 1367676-1369499 | pknD_3 | Serinethreonine-protein kinase PknD |
| 1029 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01087 | open | 1461 [NA] | 486 [AA] | 1370206-1371666 | hypothetical protein | |
| 1030 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01088 | open | 882 [NA] | 293 [AA] | 1371737-1372618 | ksgA | Ribosomal RNA small subunit methyltransferase A |
| 1031 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01089 | open | 627 [NA] | 208 [AA] | 1372748-1373374 | hypothetical protein | |
| 1032 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01090 | open | 1428 [NA] | 475 [AA] | 1373433-1374860 | cca | CCA-adding enzyme |
| 1033 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01091 | open | 807 [NA] | 268 [AA] | 1374918-1375724 | rppH | RNA pyrophosphohydrolase |
| 1034 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01092 | open | 2394 [NA] | 797 [AA] | 1375705-1378098 | hypothetical protein | |
| 1035 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01093 | open | 1797 [NA] | 598 [AA] | 1378095-1379891 | murJ | lipid II flippase MurJ |
| 1036 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01094 | open | 2220 [NA] | 739 [AA] | 1380058-1382277 | hypothetical protein | |
| 1037 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01095 | open | 942 [NA] | 313 [AA] | 1382313-1383254 | trxB | Thioredoxin reductase |
| 1038 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01096 | open | 651 [NA] | 216 [AA] | 1383405-1384055 | hypothetical protein | |
| 1039 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01097 | open | 1359 [NA] | 452 [AA] | 1384439-1385797 | noc | Nucleoid occlusion protein |
| 1040 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01098 | open | 972 [NA] | 323 [AA] | 1385797-1386768 | Iron-sulfur cluster carrier protein | |
| 1041 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01099 | open | 711 [NA] | 236 [AA] | 1387602-1388312 | rsmG | Ribosomal RNA small subunit methyltransferase G |
| 1042 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01100 | open | 555 [NA] | 184 [AA] | 1388451-1389005 | hypothetical protein | |
| 1043 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01101 | open | 1014 [NA] | 337 [AA] | 1389142-1390155 | yidC | Membrane protein insertase YidC |
| 1044 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01102 | open | 321 [NA] | 106 [AA] | 1390155-1390475 | yidD | Putative membrane protein insertion efficiency factor |
| 1045 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01103 | open | 408 [NA] | 135 [AA] | 1390514-1390921 | rnpA | Ribonuclease P protein component |
| 1046 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01104 | open | 135 [NA] | 44 [AA] | 1391033-1391167 | rpmH | 50S ribosomal protein L34 |
| 1047 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01105 | open | 1614 [NA] | 537 [AA] | 1391557-1393170 | dnaA | Chromosomal replication initiator protein DnaA |
| 1048 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01106 | open | 1125 [NA] | 374 [AA] | 1393600-1394724 | dnaN | Beta sliding clamp |
| 1049 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01107 | open | 1302 [NA] | 433 [AA] | 1394823-1396124 | recF | DNA replication and repair protein RecF |
| 1050 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01108 | open | 468 [NA] | 155 [AA] | 1396124-1396591 | hypothetical protein | |
| 1051 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01109 | open | 2091 [NA] | 696 [AA] | 1396758-1398848 | gyrB_2 | DNA gyrase subunit B |
| 1052 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01110 | open | 2631 [NA] | 876 [AA] | 1398918-1401548 | gyrA_2 | DNA gyrase subunit A |
| 1053 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01111 | open | 666 [NA] | 221 [AA] | 1401698-1402363 | hypothetical protein | |
| 1054 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01112 | open | 411 [NA] | 136 [AA] | 1402449-1402859 | mscL | Large-conductance mechanosensitive channel |
| 1055 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01113 | open | 738 [NA] | 245 [AA] | 1402883-1403620 | hypothetical protein | |
| 1056 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01114 | open | 702 [NA] | 233 [AA] | 1403776-1404477 | hypothetical protein | |
| 1057 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01115 | open | 537 [NA] | 178 [AA] | 1404511-1405047 | fhaB | FHA domain-containing protein FhaB |
| 1058 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01116 | open | 1665 [NA] | 554 [AA] | 1405051-1406715 | hypothetical protein | |
| 1059 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01117 | open | 1482 [NA] | 493 [AA] | 1406712-1408193 | mrdB | Peptidoglycan glycosyltransferase MrdB |
| 1060 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01118 | open | 1467 [NA] | 488 [AA] | 1408186-1409652 | pbpA | Penicillin-binding protein A |
| 1061 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01119 | open | 963 [NA] | 320 [AA] | 1409649-1410611 | pknD_4 | Serinethreonine-protein kinase PknD |
| 1062 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01120 | open | 2004 [NA] | 667 [AA] | 1410608-1412611 | pknB | Serinethreonine-protein kinase PknB |
| 1063 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01121 | open | 1107 [NA] | 368 [AA] | 1413013-1414119 | hypothetical protein | |
| 1064 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01122 | open | 756 [NA] | 251 [AA] | 1414165-1414920 | hypothetical protein | |
| 1065 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01123 | open | 393 [NA] | 130 [AA] | 1414998-1415390 | crgA | Cell division protein CrgA |
| 1066 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01124 | open | 1317 [NA] | 438 [AA] | 1415447-1416763 | hypothetical protein | |
| 1067 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01125 | open | 600 [NA] | 199 [AA] | 1417020-1417619 | hypothetical protein | |
| 1068 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01126 | open | 210 [NA] | 69 [AA] | 1417886-1418095 | hypothetical protein | |
| 1069 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01127 | open | 2490 [NA] | 829 [AA] | 1418296-1420785 | malP | Maltodextrin phosphorylase |
| 1070 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01128 | open | 417 [NA] | 138 [AA] | 1421023-1421439 | hypothetical protein | |
| 1071 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01129 | open | 381 [NA] | 126 [AA] | 1421558-1421938 | hypothetical protein | |
| 1072 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01130 | open | 1092 [NA] | 363 [AA] | 1422084-1423175 | trpS2 | Tryptophan--tRNA ligase 2 |
| 1073 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01131 | open | 1722 [NA] | 573 [AA] | 1423274-1424995 | hypothetical protein | |
| 1074 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01132 | open | 2757 [NA] | 918 [AA] | 1425202-1427958 | ppc | Phosphoenolpyruvate carboxylase |
| 1075 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01133 | open | 660 [NA] | 219 [AA] | 1428186-1428845 | mtcA2 | Carbonic anhydrase 2 |
| 1076 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01134 | open | 1095 [NA] | 364 [AA] | 1428901-1429995 | hypothetical protein | |
| 1077 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01135 | open | 771 [NA] | 256 [AA] | 1429992-1430762 | hypothetical protein | |
| 1078 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01136 | open | 1296 [NA] | 431 [AA] | 1430839-1432134 | hypothetical protein | |
| 1079 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01137 | open | 480 [NA] | 159 [AA] | 1432192-1432671 | dps | DNA protection during starvation protein |
| 1080 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01140 | open | 2313 [NA] | 770 [AA] | 1433304-1435616 | kdpB | Potassium-transporting ATPase ATP-binding subunit |
| 1081 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01141 | open | 1479 [NA] | 492 [AA] | 1435927-1437405 | fprA | NADPH-ferredoxin reductase FprA |
| 1082 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01142 | open | 879 [NA] | 292 [AA] | 1437511-1438389 | htpX | Protease HtpX |
| 1083 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01144 | open | 3045 [NA] | 1014 [AA] | 1438661-1441705 | hypothetical protein | |
| 1084 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01145 | open | 1179 [NA] | 392 [AA] | 1442051-1443229 | hypothetical protein | |
| 1085 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01146 | open | 564 [NA] | 187 [AA] | 1443582-1444145 | ahpC | Alkyl hydroperoxide reductase C |
| 1086 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01147 | open | 1674 [NA] | 557 [AA] | 1444272-1445945 | ahpF | NADH dehydrogenase |
| 1087 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01148 | open | 903 [NA] | 300 [AA] | 1445987-1446889 | oxyR | Hydrogen peroxide-inducible genes activator |
| 1088 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01149 | open | 1194 [NA] | 397 [AA] | 1447039-1448232 | trpB | Tryptophan synthase beta chain |
| 1089 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01150 | open | 582 [NA] | 193 [AA] | 1448803-1449384 | dcd | dCTP deaminase%2C dUMP-forming |
| 1090 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01151 | open | 2991 [NA] | 996 [AA] | 1449684-1452674 | pacL | Calcium-transporting ATPase |
| 1091 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01152 | open | 999 [NA] | 332 [AA] | 1452903-1453901 | putative tRNArRNA methyltransferase | |
| 1092 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01153 | open | 1764 [NA] | 587 [AA] | 1453898-1455661 | hypothetical protein | |
| 1093 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01154 | open | 1803 [NA] | 600 [AA] | 1455797-1457599 | hypothetical protein | |
| 1094 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01155 | open | 1326 [NA] | 441 [AA] | 1457785-1459110 | tgt | Queuine tRNA-ribosyltransferase |
| 1095 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01157 | open | 771 [NA] | 256 [AA] | 1459445-1460215 | hypothetical protein | |
| 1096 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01158 | open | 456 [NA] | 151 [AA] | 1460296-1460751 | tadA | tRNA-specific adenosine deaminase |
| 1097 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01159 | open | 1011 [NA] | 336 [AA] | 1461142-1462152 | kdgR | HTH-type transcriptional regulator KdgR |
| 1098 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01160 | open | 1494 [NA] | 497 [AA] | 1462369-1463862 | araG | Arabinose import ATP-binding protein AraG |
| 1099 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01161 | open | 1002 [NA] | 333 [AA] | 1464034-1465035 | rbsC | Ribose import permease protein RbsC |
| 1100 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01162 | open | 939 [NA] | 312 [AA] | 1465300-1466238 | rbsB | Ribose import binding protein RbsB |
| 1101 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01163 | open | 396 [NA] | 131 [AA] | 1466532-1466927 | rbsD | D-ribose pyranase |
| 1102 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01164 | open | 1062 [NA] | 353 [AA] | 1466959-1468020 | rbsK | Ribokinase |
| 1103 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01165 | open | 969 [NA] | 322 [AA] | 1468263-1469231 | hypothetical protein | |
| 1104 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01166 | open | 1920 [NA] | 639 [AA] | 1469446-1471365 | malL | Oligo-1%2C6-glucosidase |
| 1105 | SEQF8013.1_JABUHE010000001.1 | SEQF8013.1_01167 | open | 771 [NA] | 256 [AA] | 1471391-1472161 | cobB | NAD-dependent protein deacetylase |