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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Corynebacterium amycolatum HMSC072B09 (SEQF3014.1)
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PROKKA Annotation for SEQF3014.1
Genome selected: Corynebacterium amycolatum HMSC072B09
Contigs:64 Bases:2484283 bps
CDS:2139 rRNA:3
tmRNA:1 tRNA:51
Annotation Table [page:5]
Number of Records Found: 2139 [5 Pages]
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# Molecule PID Genome
Viewer
NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
2001 SEQF3014.1_KV836043.1 SEQF3014.1_02069 open 780 [NA] 259 [AA] 23107-23886 hypothetical protein
2002 SEQF3014.1_KV836043.1 SEQF3014.1_02070 open 924 [NA] 307 [AA] 23947-24870 dapF Diaminopimelate epimerase
2003 SEQF3014.1_KV836043.1 SEQF3014.1_02071 open 927 [NA] 308 [AA] 24902-25828 miaA tRNA dimethylallyltransferase
2004 SEQF3014.1_KV836043.1 SEQF3014.1_02072 open 705 [NA] 234 [AA] 25872-26576 hypothetical protein
2005 SEQF3014.1_KV836043.1 SEQF3014.1_02073 open 1365 [NA] 454 [AA] 26738-28102 putative proteinMSMEI_2664
2006 SEQF3014.1_KV836043.1 SEQF3014.1_02074 open 750 [NA] 249 [AA] 28267-29016 hypothetical protein
2007 SEQF3014.1_KV836043.1 SEQF3014.1_02075 open 1473 [NA] 490 [AA] 29009-30481 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
2008 SEQF3014.1_KV836043.1 SEQF3014.1_02076 open 609 [NA] 202 [AA] 30663-31271 recX Regulatory protein RecX
2009 SEQF3014.1_KV836043.1 SEQF3014.1_02077 open 1104 [NA] 367 [AA] 31315-32418 recA Protein RecA
2010 SEQF3014.1_KV836043.1 SEQF3014.1_02078 open 726 [NA] 241 [AA] 32940-33665 hypothetical protein
2011 SEQF3014.1_KV836043.1 SEQF3014.1_02079 open 702 [NA] 233 [AA] 33700-34401 bioM Biotin transport ATP-binding protein BioM
2012 SEQF3014.1_KV836043.1 SEQF3014.1_02080 open 621 [NA] 206 [AA] 34398-35018 ecfT Energy-coupling factor transporter transmembrane protein EcfT
2013 SEQF3014.1_KV836043.1 SEQF3014.1_02081 open 828 [NA] 275 [AA] 35024-35851 35 kDa protein
2014 SEQF3014.1_KV836043.1 SEQF3014.1_02082 open 435 [NA] 144 [AA] 35993-36427 hypothetical protein
2015 SEQF3014.1_KV836043.1 SEQF3014.1_02083 open 543 [NA] 180 [AA] 36479-37021 cinA Putative competence-damage inducible protein
2016 SEQF3014.1_KV836043.1 SEQF3014.1_02084 open 567 [NA] 188 [AA] 37046-37612 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
2017 SEQF3014.1_KV836043.1 SEQF3014.1_02085 open 1134 [NA] 377 [AA] 37644-38777 putative membrane protein
2018 SEQF3014.1_KV836043.1 SEQF3014.1_02086 open 3297 [NA] 1098 [AA] 39014-42310 hypothetical protein
2019 SEQF3014.1_KV836043.1 SEQF3014.1_02087 open 618 [NA] 205 [AA] 42416-43033 hypothetical protein
2020 SEQF3014.1_KV836043.1 SEQF3014.1_02088 open 2082 [NA] 693 [AA] 43123-45204 rnj Ribonuclease J
2021 SEQF3014.1_KV836043.1 SEQF3014.1_02089 open 906 [NA] 301 [AA] 45204-46109 dapA 4-hydroxy-tetrahydrodipicolinate synthase
2022 SEQF3014.1_KV836043.1 SEQF3014.1_02090 open 753 [NA] 250 [AA] 46168-46920 thyX Flavin-dependent thymidylate synthase
2023 SEQF3014.1_KV836043.1 SEQF3014.1_02091 open 753 [NA] 250 [AA] 46941-47693 dapB 4-hydroxy-tetrahydrodipicolinate reductase
2024 SEQF3014.1_KV836043.1 SEQF3014.1_02092 open 1389 [NA] 462 [AA] 47958-49346 ribZ_2 Riboflavin transporter RibZ
2025 SEQF3014.1_KV836043.1 SEQF3014.1_02093 open 957 [NA] 318 [AA] 49448-50404 yihR putative protein YihR
2026 SEQF3014.1_KV836043.1 SEQF3014.1_02094 open 2268 [NA] 755 [AA] 50562-52829 pnp Polyribonucleotide nucleotidyltransferase
2027 SEQF3014.1_KV836043.1 SEQF3014.1_02095 open 270 [NA] 89 [AA] 53337-53606 rpsO 30S ribosomal protein S15
2028 SEQF3014.1_KV836043.1 SEQF3014.1_02096 open 1029 [NA] 342 [AA] 53748-54776 ribF Bifunctional riboflavin kinaseFMN adenylyltransferase
2029 SEQF3014.1_KV836043.1 SEQF3014.1_02097 open 987 [NA] 328 [AA] 54808-55794 truB tRNA pseudouridine synthase B
2030 SEQF3014.1_KV836043.1 SEQF3014.1_02098 open 696 [NA] 231 [AA] 55811-56506 hypothetical protein
2031 SEQF3014.1_KV836043.1 SEQF3014.1_02099 open 1377 [NA] 458 [AA] 56503-57879 dinF DNA damage-inducible protein F
2032 SEQF3014.1_KV836043.1 SEQF3014.1_02100 open 1062 [NA] 353 [AA] 57884-58945 nrnA Bifunctional oligoribonuclease and PAP phosphatase NrnA
2033 SEQF3014.1_KV836043.1 SEQF3014.1_02101 open 432 [NA] 143 [AA] 58988-59419 rbfA Ribosome-binding factor A
2034 SEQF3014.1_KV836043.1 SEQF3014.1_02102 open 729 [NA] 242 [AA] 59781-60509 hypothetical protein
2035 SEQF3014.1_KV836043.1 SEQF3014.1_02103 open 2316 [NA] 771 [AA] 60530-62845 infB Translation initiation factor IF-2
2036 SEQF3014.1_KV836044.1 SEQF3014.1_02104 open 465 [NA] 154 [AA] 295-759 hypothetical protein
2037 SEQF3014.1_KV836044.1 SEQF3014.1_02105 open 558 [NA] 185 [AA] 875-1432 ruvC Crossover junction endodeoxyribonuclease RuvC
2038 SEQF3014.1_KV836044.1 SEQF3014.1_02106 open 621 [NA] 206 [AA] 1515-2135 ruvA Holliday junction ATP-dependent DNA helicase RuvA
2039 SEQF3014.1_KV836044.1 SEQF3014.1_02107 open 1113 [NA] 370 [AA] 2202-3314 ruvB Holliday junction ATP-dependent DNA helicase RuvB
2040 SEQF3014.1_KV836044.1 SEQF3014.1_02108 open 504 [NA] 167 [AA] 3342-3845 hypothetical protein
2041 SEQF3014.1_KV836044.1 SEQF3014.1_02109 open 1926 [NA] 641 [AA] 4157-6082 secD Protein translocase subunit SecD
2042 SEQF3014.1_KV836044.1 SEQF3014.1_02110 open 1218 [NA] 405 [AA] 6089-7306 secF Protein translocase subunit SecF
2043 SEQF3014.1_KV836044.1 SEQF3014.1_02111 open 537 [NA] 178 [AA] 7417-7953 apt Adenine phosphoribosyltransferase
2044 SEQF3014.1_KV836044.1 SEQF3014.1_02112 open 2262 [NA] 753 [AA] 7961-10222 relA Bifunctional (p)ppGpp synthasehydrolase RelA
2045 SEQF3014.1_KV836044.1 SEQF3014.1_02113 open 840 [NA] 279 [AA] 10344-11183 ppiB putative peptidyl-prolyl cis-trans isomerase B
2046 SEQF3014.1_KV836044.1 SEQF3014.1_02114 open 672 [NA] 223 [AA] 11476-12147 putative protein
2047 SEQF3014.1_KV836044.1 SEQF3014.1_02115 open 1284 [NA] 427 [AA] 12191-13474 hisS Histidine--tRNA ligase
2048 SEQF3014.1_KV836044.1 SEQF3014.1_02116 open 888 [NA] 295 [AA] 13502-14389 hypothetical protein
2049 SEQF3014.1_KV836044.1 SEQF3014.1_02117 open 1830 [NA] 609 [AA] 14661-16490 aspS Aspartate--tRNA(AspAsn) ligase
2050 SEQF3014.1_KV836044.1 SEQF3014.1_02118 open 1182 [NA] 393 [AA] 16638-17819 hypothetical protein
2051 SEQF3014.1_KV836044.1 SEQF3014.1_02119 open 1467 [NA] 488 [AA] 17827-19293 putative AAA domain-containing protein
2052 SEQF3014.1_KV836044.1 SEQF3014.1_02120 open 2661 [NA] 886 [AA] 19422-22082 alaS Alanine--tRNA ligase
2053 SEQF3014.1_KV836044.1 SEQF3014.1_02121 open 504 [NA] 167 [AA] 22120-22623 Putative pre-16S rRNA nuclease
2054 SEQF3014.1_KV836044.1 SEQF3014.1_02122 open 1227 [NA] 408 [AA] 22883-24109 mltG Endolytic murein transglycosylase
2055 SEQF3014.1_KV836044.1 SEQF3014.1_02123 open 816 [NA] 271 [AA] 24124-24939 aroE Shikimate dehydrogenase (NADP(+))
2056 SEQF3014.1_KV836044.1 SEQF3014.1_02124 open 612 [NA] 203 [AA] 24966-25577 hypothetical protein
2057 SEQF3014.1_KV836044.1 SEQF3014.1_02125 open 1227 [NA] 408 [AA] 25633-26859 aroC Chorismate synthase
2058 SEQF3014.1_KV836044.1 SEQF3014.1_02126 open 522 [NA] 173 [AA] 26900-27421 aroK Shikimate kinase
2059 SEQF3014.1_KV836044.1 SEQF3014.1_02127 open 1110 [NA] 369 [AA] 27509-28618 aroB 3-dehydroquinate synthase
2060 SEQF3014.1_KV836044.1 SEQF3014.1_02128 open 477 [NA] 158 [AA] 28615-29091 aroQ 3-dehydroquinate dehydratase
2061 SEQF3014.1_KV836044.1 SEQF3014.1_02129 open 1173 [NA] 390 [AA] 29088-30260 ypdF Aminopeptidase YpdF
2062 SEQF3014.1_KV836044.1 SEQF3014.1_02130 open 564 [NA] 187 [AA] 30348-30911 efp Elongation factor P
2063 SEQF3014.1_KV836044.1 SEQF3014.1_02131 open 705 [NA] 234 [AA] 30960-31664 nusB Transcription antitermination protein NusB
2064 SEQF3014.1_KV836044.1 SEQF3014.1_02132 open 570 [NA] 189 [AA] 31916-32485 pyrR Bifunctional protein PyrR
2065 SEQF3014.1_KV836044.1 SEQF3014.1_02133 open 954 [NA] 317 [AA] 32482-33435 pyrB Aspartate carbamoyltransferase
2066 SEQF3014.1_KV836044.1 SEQF3014.1_02134 open 1362 [NA] 453 [AA] 33436-34797 pyrC Dihydroorotase
2067 SEQF3014.1_KV836044.1 SEQF3014.1_02135 open 1266 [NA] 421 [AA] 34803-36068 carA Carbamoyl-phosphate synthase small chain
2068 SEQF3014.1_KV836044.1 SEQF3014.1_02136 open 3360 [NA] 1119 [AA] 36093-39452 carB_3 Carbamoyl-phosphate synthase large chain
2069 SEQF3014.1_KV836044.1 SEQF3014.1_02137 open 870 [NA] 289 [AA] 39454-40323 pyrF Orotidine 5-phosphate decarboxylase
2070 SEQF3014.1_KV836044.1 SEQF3014.1_02138 open 327 [NA] 108 [AA] 40745-41071 hypothetical protein
2071 SEQF3014.1_KV836044.1 SEQF3014.1_02139 open 573 [NA] 190 [AA] 41077-41649 gmk Guanylate kinase
2072 SEQF3014.1_KV836044.1 SEQF3014.1_02140 open 279 [NA] 92 [AA] 41767-42045 rpoZ DNA-directed RNA polymerase subunit omega
2073 SEQF3014.1_KV836044.1 SEQF3014.1_02141 open 1281 [NA] 426 [AA] 42073-43353 coaBC Coenzyme A biosynthesis bifunctional protein CoaBC
2074 SEQF3014.1_KV836044.1 SEQF3014.1_02142 open 1218 [NA] 405 [AA] 43472-44689 metK S-adenosylmethionine synthase
2075 SEQF3014.1_KV836044.1 SEQF3014.1_02143 open 2037 [NA] 678 [AA] 44739-46775 priA_2 putative primosomal protein N
2076 SEQF3014.1_KV836044.1 SEQF3014.1_02144 open 504 [NA] 167 [AA] 46836-47339 def_2 Peptide deformylase
2077 SEQF3014.1_KV836044.1 SEQF3014.1_02145 open 975 [NA] 324 [AA] 47434-48408 fmt Methionyl-tRNA formyltransferase
2078 SEQF3014.1_KV836044.1 SEQF3014.1_02146 open 1458 [NA] 485 [AA] 48409-49866 Putative methyltransferase
2079 SEQF3014.1_KV836044.1 SEQF3014.1_02147 open 669 [NA] 222 [AA] 49878-50546 rpe Ribulose-phosphate 3-epimerase
2080 SEQF3014.1_KV836044.1 SEQF3014.1_02148 open 1053 [NA] 350 [AA] 50563-51615 ribD Riboflavin biosynthesis protein RibD
2081 SEQF3014.1_KV836044.1 SEQF3014.1_02149 open 588 [NA] 195 [AA] 51685-52272 ribE Riboflavin synthase
2082 SEQF3014.1_KV836044.1 SEQF3014.1_02150 open 1263 [NA] 420 [AA] 52284-53546 ribBA Riboflavin biosynthesis protein RibBA
2083 SEQF3014.1_KV836044.1 SEQF3014.1_02151 open 483 [NA] 160 [AA] 53547-54029 ribH 6%2C7-dimethyl-8-ribityllumazine synthase
2084 SEQF3014.1_KV836044.1 SEQF3014.1_02152 open 495 [NA] 164 [AA] 54032-54526 putative protein
2085 SEQF3014.1_KV836044.1 SEQF3014.1_02153 open 2049 [NA] 682 [AA] 54556-56604 uvrC UvrABC system protein C
2086 SEQF3014.1_KV836044.1 SEQF3014.1_02154 open 891 [NA] 296 [AA] 56717-57607 Nucleotide-binding protein
2087 SEQF3014.1_KV836044.1 SEQF3014.1_02155 open 948 [NA] 315 [AA] 57631-58578 Putative gluconeogenesis factor
2088 SEQF3014.1_KV836044.1 SEQF3014.1_02156 open 1017 [NA] 338 [AA] 58752-59768 whiA putative cell division protein WhiA
2089 SEQF3014.1_KV836044.1 SEQF3014.1_02157 open 1005 [NA] 334 [AA] 59952-60956 gap Glyceraldehyde-3-phosphate dehydrogenase
2090 SEQF3014.1_KV836044.1 SEQF3014.1_02158 open 1212 [NA] 403 [AA] 61067-62278 pgk Phosphoglycerate kinase
2091 SEQF3014.1_KV836044.1 SEQF3014.1_02159 open 789 [NA] 262 [AA] 62348-63136 tpiA Triosephosphate isomerase
2092 SEQF3014.1_KV836044.1 SEQF3014.1_02160 open 2829 [NA] 942 [AA] 63339-66167 ppc Phosphoenolpyruvate carboxylase
2093 SEQF3014.1_KV836044.1 SEQF3014.1_02161 open 237 [NA] 78 [AA] 66269-66505 secG putative protein-export membrane protein SecG
2094 SEQF3014.1_KV836044.1 SEQF3014.1_02162 open 768 [NA] 255 [AA] 66623-67390 pgl 6-phosphogluconolactonase
2095 SEQF3014.1_KV836044.1 SEQF3014.1_02163 open 1017 [NA] 338 [AA] 67387-68403 hypothetical protein
2096 SEQF3014.1_KV836044.1 SEQF3014.1_02164 open 1605 [NA] 534 [AA] 68454-70058 zwf2 Glucose-6-phosphate 1-dehydrogenase 2
2097 SEQF3014.1_KV836044.1 SEQF3014.1_02165 open 393 [NA] 130 [AA] 70163-70555 hypothetical protein
2098 SEQF3014.1_KV836044.1 SEQF3014.1_02166 open 720 [NA] 239 [AA] 70552-71271 hypothetical protein
2099 SEQF3014.1_KV836044.1 SEQF3014.1_02167 open 720 [NA] 239 [AA] 71268-71987 hypothetical protein
2100 SEQF3014.1_KV836044.1 SEQF3014.1_02168 open 1101 [NA] 366 [AA] 72256-73356 tal Transaldolase
2101 SEQF3014.1_KV836044.1 SEQF3014.1_02169 open 2100 [NA] 699 [AA] 73542-75641 tkt Transketolase
2102 SEQF3014.1_KV836044.1 SEQF3014.1_02170 open 942 [NA] 313 [AA] 75904-76845 ctaB Protoheme IX farnesyltransferase
2103 SEQF3014.1_KV836044.1 SEQF3014.1_02171 open 804 [NA] 267 [AA] 77228-78031 ctaA Heme A synthase
2104 SEQF3014.1_KV836044.1 SEQF3014.1_02172 open 804 [NA] 267 [AA] 78335-79138 hypothetical protein
2105 SEQF3014.1_KV836044.1 SEQF3014.1_02173 open 969 [NA] 322 [AA] 79138-80106 lnrL_2 Linearmycin resistance ATP-binding protein LnrL
2106 SEQF3014.1_KV836044.1 SEQF3014.1_02174 open 1740 [NA] 579 [AA] 80132-81871 Alpha-(1->6)-mannopyranosyltransferase
2107 SEQF3014.1_KV836044.1 SEQF3014.1_02175 open 699 [NA] 232 [AA] 82057-82755 hypothetical protein
2108 SEQF3014.1_KV836044.1 SEQF3014.1_02176 open 1467 [NA] 488 [AA] 82752-84218 hypothetical protein
2109 SEQF3014.1_KV836044.1 SEQF3014.1_02177 open 1191 [NA] 396 [AA] 84224-85414 hypothetical protein
2110 SEQF3014.1_KV836044.1 SEQF3014.1_02178 open 762 [NA] 253 [AA] 85507-86268 sufC Vegetative protein 296
2111 SEQF3014.1_KV836044.1 SEQF3014.1_02179 open 1254 [NA] 417 [AA] 86261-87514 csd putative cysteine desulfurase
2112 SEQF3014.1_KV836044.1 SEQF3014.1_02180 open 516 [NA] 171 [AA] 87535-88050 sufU Zinc-dependent sulfurtransferase SufU
2113 SEQF3014.1_KV836044.1 SEQF3014.1_02181 open 465 [NA] 154 [AA] 88043-88507 hypothetical protein
2114 SEQF3014.1_KV836044.1 SEQF3014.1_02182 open 1386 [NA] 461 [AA] 89044-90429 lysP Lysine-specific permease
2115 SEQF3014.1_KV836044.1 SEQF3014.1_02183 open 1209 [NA] 402 [AA] 90606-91814 crtL Lycopene beta cyclase
2116 SEQF3014.1_KV836044.1 SEQF3014.1_02184 open 1632 [NA] 543 [AA] 91835-93466 ybiT_2 putative ABC transporter ATP-binding protein YbiT
2117 SEQF3014.1_KV836044.1 SEQF3014.1_02185 open 759 [NA] 252 [AA] 93463-94221 hypothetical protein
2118 SEQF3014.1_KV836044.1 SEQF3014.1_02186 open 2277 [NA] 758 [AA] 94214-96490 hypothetical protein
2119 SEQF3014.1_KV836044.1 SEQF3014.1_02187 open 747 [NA] 248 [AA] 96536-97282 hypothetical protein
2120 SEQF3014.1_KV836044.1 SEQF3014.1_02188 open 750 [NA] 249 [AA] 97330-98079 hypothetical protein
2121 SEQF3014.1_KV836044.1 SEQF3014.1_02189 open 567 [NA] 188 [AA] 98222-98788 acnR HTH-type transcriptional repressor AcnR
2122 SEQF3014.1_KV836044.1 SEQF3014.1_02190 open 2787 [NA] 928 [AA] 99011-101797 acn Aconitate hydratase A
2123 SEQF3014.1_KV836044.1 SEQF3014.1_02191 open 510 [NA] 169 [AA] 102165-102674 hypothetical protein
2124 SEQF3014.1_KV836044.1 SEQF3014.1_02192 open 1620 [NA] 539 [AA] 103306-104925 hypothetical protein
2125 SEQF3014.1_KV836044.1 SEQF3014.1_02193 open 1005 [NA] 334 [AA] 104980-105984 hypothetical protein
2126 SEQF3014.1_KV836044.1 SEQF3014.1_02194 open 849 [NA] 282 [AA] 105984-106832 putative protein
2127 SEQF3014.1_KV836044.1 SEQF3014.1_02195 open 993 [NA] 330 [AA] 106948-107940 hypothetical protein
2128 SEQF3014.1_KV836044.1 SEQF3014.1_02196 open 1059 [NA] 352 [AA] 108060-109118 hemH Ferrochelatase
2129 SEQF3014.1_KV836044.1 SEQF3014.1_02197 open 858 [NA] 285 [AA] 109159-110016 putative protein
2130 SEQF3014.1_KV836044.1 SEQF3014.1_02198 open 855 [NA] 284 [AA] 110082-110936 hypothetical protein
2131 SEQF3014.1_KV836044.1 SEQF3014.1_02199 open 360 [NA] 119 [AA] 111075-111434 hypothetical protein
2132 SEQF3014.1_KV836044.1 SEQF3014.1_02200 open 1401 [NA] 466 [AA] 111526-112926 hypothetical protein
2133 SEQF3014.1_KV836044.1 SEQF3014.1_02201 open 573 [NA] 190 [AA] 112931-113503 hypothetical protein
2134 SEQF3014.1_KV836044.1 SEQF3014.1_02202 open 657 [NA] 218 [AA] 113631-114287 hypothetical protein
2135 SEQF3014.1_KV836044.1 SEQF3014.1_02203 open 1893 [NA] 630 [AA] 114689-116581 mutA putative methylmalonyl-CoA mutase small subunit
2136 SEQF3014.1_KV836044.1 SEQF3014.1_02204 open 2220 [NA] 739 [AA] 116590-118809 mutB putative methylmalonyl-CoA mutase large subunit
2137 SEQF3014.1_KV836044.1 SEQF3014.1_02205 open 1113 [NA] 370 [AA] 118876-119988 putative GTPase
2138 SEQF3014.1_KV836044.1 SEQF3014.1_02206 open 333 [NA] 110 [AA] 120049-120381 kmtR HTH-type transcriptional regulator KmtR
2139 SEQF3014.1_KV836044.1 SEQF3014.1_02207 open 1482 [NA] 493 [AA] 120580-122061 clsA Cardiolipin synthase A